Gene PP_3787 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_3787 
Symbol 
ID1046292 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp4315002 
End bp4315919 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content60% 
IMG OID637147195 
Producthypothetical protein 
Protein accessionNP_745917 
Protein GI26990492 
COG category[I] Lipid transport and metabolism 
COG ID[COG0332] 3-oxoacyl-[acyl-carrier-protein] synthase III 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0256847 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGTCT CTCTTCGCAA TGTCGACAGT GTCCTCGGCG AGCAGCAGTT TCCCTATTTC 
GAGGTGGAGG ACTTCGAGCG CAAGCGACGC GAATATGGCC TTCCTGATGC ACCGCAGCTG
ATGGGTTGGC ACCGACTCGG CCGGACGCAG GGTGATGCCT TCCAGCTGGC CGAGCACTTG
ATCAGGCGGA TATTGGCCAA CTCGGGGTCA GCACAATGTA TTGATCACCT GATGGTTTGC
AGCAGTCGAT TCTCCATGGG TTTCCTGCAA GGCAACGACC GCCTCGACAC CCTGATGCAT
AACTGCGGCC TCGGGTCCGT GCCGGTCACG GGGCTGACGC TCAGTGGCTG CAACAGCCTG
TTCAACGGAC TGCACCTGGC CGATGCCTTG ATAGGCTCAG GCAAGTGCAA AAACGTACTG
CTGGTCACCG CCGACACGTC CGTCAGTGAG GCGCATCGTT TCGATCGCAA CTGCATGTTC
AGCGATGCGG CAGGCGGGAT GATCCTGAGC AGCGGCGAAA GCTCATCGCT AACCCTGGTC
GATACCGCCT GCAGCTTCGG CAGAGCATCC GACCCAGGCG CATTCTTCCG CGGCGATCTC
GCGTCCCTGG ACACTCAGGT CACGCGCTTG CTCGGCCGCT ACGGGCTGCA GCGATCAGAC
ATCGCCAAAG TCGTACTGCC CAACTTCTAC CTGCCGGTTG TCAACATGCT GATGAACCGC
CTCGGCCTTT CAGCCCCGCA ACGGTTCGCG GGCGCTGCGA CGCAAATGGC TCACTGCTTC
GCCAGCGATT ACCTGATGGC GCTCGCCGAG CTTTCGCAGC GGCAAATAGC GGCCGACGAG
CACTACCTTC TGATCGGCTA TGCGGATCTT CATCAGGGAA TCAGTCTCGT ACGCCACACA
GCAAGGAGCG CAGCATGA
 
Protein sequence
MTVSLRNVDS VLGEQQFPYF EVEDFERKRR EYGLPDAPQL MGWHRLGRTQ GDAFQLAEHL 
IRRILANSGS AQCIDHLMVC SSRFSMGFLQ GNDRLDTLMH NCGLGSVPVT GLTLSGCNSL
FNGLHLADAL IGSGKCKNVL LVTADTSVSE AHRFDRNCMF SDAAGGMILS SGESSSLTLV
DTACSFGRAS DPGAFFRGDL ASLDTQVTRL LGRYGLQRSD IAKVVLPNFY LPVVNMLMNR
LGLSAPQRFA GAATQMAHCF ASDYLMALAE LSQRQIAADE HYLLIGYADL HQGISLVRHT
ARSAA