Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_3772 |
Symbol | |
ID | 1046362 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 4299368 |
End bp | 4300237 |
Gene Length | 870 bp |
Protein Length | 289 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637147180 |
Product | putative phage repressor |
Protein accession | NP_745902 |
Protein GI | 26990477 |
COG category | [K] Transcription |
COG ID | [COG2932] Predicted transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0262025 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.000000544418 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
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Sequence |
Gene sequence | ATGCGCACAT TTAGCAGCAA GCTAAACACT GGCATGCTTC ACCCCATGGA CATCTACCAA ATTCGCAAGC ACAACCTGGT GAAGCTGATC GGCAGCCAGA GAAAGGGCAC CTGCGCAGAG CGCTGGGGGA TGGCGCCTGC ACACCTTAGC CAGATCCTTT CCGACAAGAC CGTGAAAAAC CTGGGCGATG ACGTGGCCCG CCGCATCGAG GGCATCGAAG GCTTGCCACG GGGCTGGTTC GACGCGCTGT CGCCAGGCGA ACACGCACAA GCGGCTGTCG AGCCAGGTGA CAACAAGCTC TCTGCAGCCG ACCTGGTCAA ACAGATGCTG GCCCGAAGCG GCAAAGGTAT CTCCGAAGAA ACCCGGCAAA GGCTGCTGGC AGCGGCGCAA GAGCCTGCAG ATGCCACGCT GCTGGAGGCC GAGCCGCTTC GCCCCGGCCT GGTCGGTGAC GAAGTGTGGA TCGCCCACTA TGACGTGCGG GCAGCCATGG GTGGCGGCCA GATCCCCCAC GACTACCCCG AGATGTTCAA GGACGTTCGC GTCAGCCCCA GCCACCTGCG CGAACTGGGC GTGACGTTCA GCGAGCACCA TCACCTGAAG ATGGTGACTG GCTGGGGCCA GTCGATGGAG CCGACCATCA GGCACCGCGA CCCGCTGATC GTCGACGTCA GCATCCGCGA ATTCGTCGGT GATGGTATCT ACTTCTTTTC CTGGGGCGAC CACATCTACA TCAAGCGGCT ACAGATCGCG GACGAGGACC ACTTCGAGAT GATCTCCGAC AACTCGCGGC ACAAAGACCG CATGATTCGT CGGGAAGAGA CCTACATACA GGCCAGGGTC CTGCTGGTGT GGAATGCCCA CCTTGTATAA
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Protein sequence | MRTFSSKLNT GMLHPMDIYQ IRKHNLVKLI GSQRKGTCAE RWGMAPAHLS QILSDKTVKN LGDDVARRIE GIEGLPRGWF DALSPGEHAQ AAVEPGDNKL SAADLVKQML ARSGKGISEE TRQRLLAAAQ EPADATLLEA EPLRPGLVGD EVWIAHYDVR AAMGGGQIPH DYPEMFKDVR VSPSHLRELG VTFSEHHHLK MVTGWGQSME PTIRHRDPLI VDVSIREFVG DGIYFFSWGD HIYIKRLQIA DEDHFEMISD NSRHKDRMIR REETYIQARV LLVWNAHLV
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