Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_3756 |
Symbol | |
ID | 1046378 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 4285455 |
End bp | 4286036 |
Gene Length | 582 bp |
Protein Length | 193 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637147164 |
Product | TetR family transcriptional regulator |
Protein accession | NP_745886 |
Protein GI | 26990461 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCCCCGG TCAATGCCGC AATGCGCTGT GCCAACTTTG AGGAGCGACG TGACCGGGCC ATGGCATTGT TTGCCGAAAA GGGCTTTGGC CAGGTCAGCA TGCGCGAGCT GGCGGCCCAT GTGGGGCTTA CCGCCGGCTC GCTGTACCAT CACTTTCCCA GCAAGCAGGA CCTGCTGTAC GACTTGATCG AAGAGTTGTA CGAAGAGCTG CAGGCCACCC TGGACCAGGC CCGCCGGGCC ATGGCCCGTG GGGCATCGGC GTTGAGCTGC CTGATTGCTG CGCACTGGCA GCTGCATGCC GAGCGGCCGC TGCAGTTCCG GCTGGCCGAA CGGGATTTGT GTTGTTTGAG TGAGGCGCAA CAGGCGCACC TGGCATCGTT GCGCAAGCGC TATGAGGCGG GTTTGCTGCG CCTGATCGCA CCGCAAGCGA AACTGCCGGG GCAAGCGTTG GACGCCACAG CGCATGTACT GGCGACGCTT CTCAACCAGC TGCCGGGGCT GCTCAAAGCA ATGCCTGAAG AGCAGGGCTT GGAGCTGATG GAAAACTTGC TGGTCGGGGG CATTGAGCGG ACGCTGCGGT AG
|
Protein sequence | MPPVNAAMRC ANFEERRDRA MALFAEKGFG QVSMRELAAH VGLTAGSLYH HFPSKQDLLY DLIEELYEEL QATLDQARRA MARGASALSC LIAAHWQLHA ERPLQFRLAE RDLCCLSEAQ QAHLASLRKR YEAGLLRLIA PQAKLPGQAL DATAHVLATL LNQLPGLLKA MPEEQGLELM ENLLVGGIER TLR
|
| |