Gene PP_3738 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_3738 
Symbol 
ID1046176 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp4265742 
End bp4266455 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content63% 
IMG OID637147148 
ProductGntR family transcriptional regulator 
Protein accessionNP_745870 
Protein GI26990445 
COG category[K] Transcription 
COG ID[COG1802] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAAAC CCGGTCAGAT GGTGCTGGTT GCGTTGCGCA AGATGATCGC TTCAGGCGAG 
TTGGCGGCCG GCGAGCGCTT GATGGAAGTC CCAACCGCTG AACTGTTCGG CGTTTCACGC
ATGCCGGTGC GCATGGCATT TCGCACCCTC GAACAGGAAG GCCTGCTGGT GCGCTTTGGT
GGCCGGGGGT TTCAGGTGCG CTCGGTCAGC GCCGATGACA TCGCGGGTGC GGTCGAGGTG
CGCGGTGTGC TGGAGGGGTT GGCGGCGCGT CAGGCTGCAG AACGTGGCTT GTCGGTGCAA
GCACGCGCTG CGTTGCAACA ATGCCTGGTC GACGGCGATC AGCTGTTCGA CAAGGGCTTT
GTGAGCGAAG ACGACTTGCA GGTCTATCAC GACCTGAACA TGCGCTTTCA TCAGGTGATC
ATCGACGCCA GCCACAACCC GGCCATTGCC GTTGCCCTGG CGCGCAACGA TCACCTGCCA
TTCGCCTCGG TCACCGCACT GGCGGTGGAC CGCCATGATC TGGCTCGCGA ATACCGGCGC
TTCAACTTCG CCCATATGCA GCACCACGCC GTGTTCGACG CCCTGGTCAA CCGCCAGGGT
GCCCGCGCCG AAGCGATCAT GCGCGAGCAC GCCAATGCCA CCTTGCGCTA TGCCGAAACC
TTTGGCGGGG CTGCGGCAGA CGCGGGCATG AAAGTCATCC TGCCCTCGTC GTAA
 
Protein sequence
MSKPGQMVLV ALRKMIASGE LAAGERLMEV PTAELFGVSR MPVRMAFRTL EQEGLLVRFG 
GRGFQVRSVS ADDIAGAVEV RGVLEGLAAR QAAERGLSVQ ARAALQQCLV DGDQLFDKGF
VSEDDLQVYH DLNMRFHQVI IDASHNPAIA VALARNDHLP FASVTALAVD RHDLAREYRR
FNFAHMQHHA VFDALVNRQG ARAEAIMREH ANATLRYAET FGGAAADAGM KVILPSS