Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_3738 |
Symbol | |
ID | 1046176 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 4265742 |
End bp | 4266455 |
Gene Length | 714 bp |
Protein Length | 237 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637147148 |
Product | GntR family transcriptional regulator |
Protein accession | NP_745870 |
Protein GI | 26990445 |
COG category | [K] Transcription |
COG ID | [COG1802] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCAAAC CCGGTCAGAT GGTGCTGGTT GCGTTGCGCA AGATGATCGC TTCAGGCGAG TTGGCGGCCG GCGAGCGCTT GATGGAAGTC CCAACCGCTG AACTGTTCGG CGTTTCACGC ATGCCGGTGC GCATGGCATT TCGCACCCTC GAACAGGAAG GCCTGCTGGT GCGCTTTGGT GGCCGGGGGT TTCAGGTGCG CTCGGTCAGC GCCGATGACA TCGCGGGTGC GGTCGAGGTG CGCGGTGTGC TGGAGGGGTT GGCGGCGCGT CAGGCTGCAG AACGTGGCTT GTCGGTGCAA GCACGCGCTG CGTTGCAACA ATGCCTGGTC GACGGCGATC AGCTGTTCGA CAAGGGCTTT GTGAGCGAAG ACGACTTGCA GGTCTATCAC GACCTGAACA TGCGCTTTCA TCAGGTGATC ATCGACGCCA GCCACAACCC GGCCATTGCC GTTGCCCTGG CGCGCAACGA TCACCTGCCA TTCGCCTCGG TCACCGCACT GGCGGTGGAC CGCCATGATC TGGCTCGCGA ATACCGGCGC TTCAACTTCG CCCATATGCA GCACCACGCC GTGTTCGACG CCCTGGTCAA CCGCCAGGGT GCCCGCGCCG AAGCGATCAT GCGCGAGCAC GCCAATGCCA CCTTGCGCTA TGCCGAAACC TTTGGCGGGG CTGCGGCAGA CGCGGGCATG AAAGTCATCC TGCCCTCGTC GTAA
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Protein sequence | MSKPGQMVLV ALRKMIASGE LAAGERLMEV PTAELFGVSR MPVRMAFRTL EQEGLLVRFG GRGFQVRSVS ADDIAGAVEV RGVLEGLAAR QAAERGLSVQ ARAALQQCLV DGDQLFDKGF VSEDDLQVYH DLNMRFHQVI IDASHNPAIA VALARNDHLP FASVTALAVD RHDLAREYRR FNFAHMQHHA VFDALVNRQG ARAEAIMREH ANATLRYAET FGGAAADAGM KVILPSS
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