Gene PP_3736 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_3736 
SymbolvanA 
ID1046507 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp4263705 
End bp4264772 
Gene Length1068 bp 
Protein Length355 aa 
Translation table11 
GC content63% 
IMG OID637147146 
ProductRieske (2Fe-2S) domain protein 
Protein accessionNP_745868 
Protein GI26990443 
COG category[P] Inorganic ion transport and metabolism
[R] General function prediction only 
COG ID[COG4638] Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.554225 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACCCCA AAAACACCTG GTACGTCGCC TGCACCCCCG ATGAGATCGC CACCAAACCC 
CTGGGCCGGC AGATCTGCGG GGAAAAAATC GTGTTCTACC GCGCCCGCGA GAACCAAGTA
GCCGCCGTCG AGGACTTCTG CCCGCACCGC GGCGCACCGT TGTCGTTGGG CTATGTCGAG
GACGGCAACC TGGTGTGCGG CTACCACGGC CTGGTGATGG GTTGCGACGG CAAGACCGTG
TCGATGCCGG GCCAACGGGT GCGTGGCTTC CCCTGCAACA AGACCTTTGC GGCCGTCGAG
CGCTATGGCT TCATCTGGGT CTGGCCCGGT GACCAGGCGC AGGCCGACCC GGCGCTGATT
CCGCATCTGG AATGGGCGGT GAGTGATGAG TGGGCCTACG GCGGCGGGCT GTTCCACATC
GGTTGCGACT ACCGCCTGAT GATCGACAAC CTCATGGACC TCACCCATGA AACCTATGTG
CACGCCTCCA GCATCGGCCA GAAGGAGATC GACGAGGCAC CGCCGGTCAC CACCGTCACC
GGCGACGAAG TGGTCACCGC CCGGCACATG GAAAACATCA TGGCGCCACC GTTCTGGCGC
ATGGCCTTGC GTGGCAATGG CCTGGCCGAC GATGTACCAG TGGACCGCTG GCAGATCTGC
CGTTTCACCC CACCTAGCCA TGTGCTGATC GAAGTGGGTG TAGCGCATGC CGGCAAGGGC
GGCTACCACG CCGAGGCACA GCATAAGGCG TCGAGCATCG TGGTCGACTT CATCACCCCT
GAGAGCGATA CCTCTATCTG GTACTTCTGG GGCATGGCGC GCAACTTCGC TGCGCACGAC
CAGACCCTGA CCGACAACAT TCGTGAGGGC CAGGGCAAGA TTTTCAGCGA AGACCTGGAA
ATGCTCGAAC GCCAGCAGCA GAACCTGCTG GCCCACCCCG AGCGCAACTT GCTGAAGCTG
AATATCGACG CCGGCGGCGT GCAGTCACGC AAAGTGCTGG AGCGGATCAT CGCCCAAGAG
CGTGCGCCGC AGCCGCAACT GATCGCCACC AGCGCCAACC CTGCCTGA
 
Protein sequence
MYPKNTWYVA CTPDEIATKP LGRQICGEKI VFYRARENQV AAVEDFCPHR GAPLSLGYVE 
DGNLVCGYHG LVMGCDGKTV SMPGQRVRGF PCNKTFAAVE RYGFIWVWPG DQAQADPALI
PHLEWAVSDE WAYGGGLFHI GCDYRLMIDN LMDLTHETYV HASSIGQKEI DEAPPVTTVT
GDEVVTARHM ENIMAPPFWR MALRGNGLAD DVPVDRWQIC RFTPPSHVLI EVGVAHAGKG
GYHAEAQHKA SSIVVDFITP ESDTSIWYFW GMARNFAAHD QTLTDNIREG QGKIFSEDLE
MLERQQQNLL AHPERNLLKL NIDAGGVQSR KVLERIIAQE RAPQPQLIAT SANPA