Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_3731 |
Symbol | |
ID | 1046327 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 4257690 |
End bp | 4258334 |
Gene Length | 645 bp |
Protein Length | 214 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637147141 |
Product | TetR family transcriptional regulator |
Protein accession | NP_745863 |
Protein GI | 26990438 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTCAGG AAGCCCGCTA CCACCGCATG CTGCCGGAAT TGCGCAAAGC CAACCTGGTC GAGGCGACCC TGGTGTGCCT CAAACGCCAT GGTTTCCAGG GGGCGTCGAT CCGCAAGATT TCGGCCGAGG CCGGGGTCTC GGTCGGGCTG ATCAGCCACC ATTACGCGGG CAAGGACGAA CTGGTGGCAG AGGCTTACAT GGCCGTCACC GGTCGGGTGA TGGGCCTGTT GCGTGAGGCC ATGGCCCAGG CCGCGCCCAA TGCCCGCGAG CGGCTGTCCG CGTTCTTTCG TGCCTCGTTC TGCGCCGAGC TGCTCGACCC GCAATTGCTC GATGCCTGGC TGGCTTTCTG GGGGGCGGTG AAGACCGCCG ACGCGATCAA CCAGGTGCAC GACCACTCCT ACGGCGAGTA CCGCAACGAA CTTGGCCAGC TACTGGCCAG GCTGGCCGAG GAGGAGGGCT GGCAGGGCTT CGATGCCGAC CTGGCGGCCA TCAGCCTGAG CGCCTTGCTT GATGGCCTGT GGCTGGAGTC GGGCCTGAAC CCCGGCACCT TCACCCCCGA GCAGGGCGTG ATCATCTGCG AGGCCTGGGT CGACGGCCTG CAGGCCGGTG GCCGCAGGCG CTTCAGCCTG TCCGAGGGCT GTTGA
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Protein sequence | MTQEARYHRM LPELRKANLV EATLVCLKRH GFQGASIRKI SAEAGVSVGL ISHHYAGKDE LVAEAYMAVT GRVMGLLREA MAQAAPNARE RLSAFFRASF CAELLDPQLL DAWLAFWGAV KTADAINQVH DHSYGEYRNE LGQLLARLAE EEGWQGFDAD LAAISLSALL DGLWLESGLN PGTFTPEQGV IICEAWVDGL QAGGRRRFSL SEGC
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