Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_3728 |
Symbol | |
ID | 1046490 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 4253872 |
End bp | 4256124 |
Gene Length | 2253 bp |
Protein Length | 750 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637147138 |
Product | multi-sensor hybrid histidine kinase |
Protein accession | NP_745860 |
Protein GI | 26990435 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATTCGCC TGCACACCGA TGGCCTGCTG CGCCGCCTGC TGCGGTTCAT CCTGTTGTTC AGCCTGTGCT TTACCGTACT GGCCAGTAGC GTGCAGCTGT ATTTCGAATA CCGCCGCGAG ATGCGCGACA TCGAGGCGCG CATGGCGTTG ATCCGTGCAG GCTACCTCGC CAGCCTGGAG CGCAGCCTGT GGGACTTGGA CGAGGCGCAG CTGGATACGC AATTGCGCGG CCTGGTGGAT TTTTCCGACG TGGCCCGGGT GCGCTTGGTT AGCGATGATT TTCAACTGCT GCGAGGAGAG GCCGAACCCA AGGGGCCGCT GCGCATCGAG CGCTTCCCCC TGGATTATCA GCCCCCCTCG GGCCCCGCCA GGCACCTGGG TGAGCTTGAA GTGAGTATCG ACTTGGGTGC GGTGCACCAT CGGTTGTATG CCACCGGCCT TGCCAGCCTG CTGTGGATGG GCGTGTTCCT GTGTGGGCTG GCAGTGGCGC TGTCGGGGCT GTTCTATCGC CTGGTCACCC GCCATCTGCA AGTGATGGCC GAGTTCGCCC GCCGCATTGG CGCCGGCCAG TGGCAGGAGC CGTTGCGCCT TGGCCGCCGC CGATCATCGC GCCCCGACGA AATCGACACG GTGGCCAATG CCCTGGACGA TATGCGTCGC GCCATCCTCA GCGATATCGA GCGCCGTGAG CGTGACCGCC TGGAACTACA GGACAAACGC GACGAATTGC AGGCCATGGT CGAGCGGCGT ACGGCCAGCC TGGCTCGGGC CAAGGACGAG GCCGAGGCTG CCAACCTGGC CAAGTCGCGC TTTTTGGCGA CCATGAGCCA TGAATTGCGT ACGCCGCTCA ACGGTATTCT GGGCATGGCC GAACTGCTGC GCGGCGGGCG CCTGGAGGTC GCCGACCGCC AACGTGTCGA GGCCTTGTAC AAGGCCGGCG AGGGGCTGTT GGCGATTCTC AACGAAGTGC TGTATTTCGC CCGGCTCGAA GAAGGCGAGA GCCGCGCCGA ACGGGTGGTG TTTTCCTTGC GTCAGTTGTG CCAGGAAGTG CTGGCGTTGC TCGAACCCAT GGCCATGGAG AATGCCGACA CCCTGCAACT GCAGGTCGAT GAGCAACTGG CCGCGTACCA GTACGGCGCA GAGCAGTACC TGCGACAGGT GCTGAGCAAT CTGCTGGCCA ACGCCATCAA GTTCACTGAG CACGGCCAGG TACAGCTGAC GGTACAGGTG CTTGCCAATA ACGAGTGCTC GCAGCGCTTG CGGCTGTCGG TCCGTGACAA TGGTATCGGT ATCGAGCCCG CCGTTCAGGC GAAGATCTTC GACCGTTTCG TCCAGGCCAG CGAAGCTGTG ACCCAGCGCT ATGGCGGCAC TGGCCTGGGC CTGGCGATCT GCAAGCACCT GGTGGAAAAA CTGGGCGGTA GCATCGGCCT TGAGAGCGTT CAAGGGCAGG GCAGCTGCTT TTGGTTCGAG CTCGACATGG CTCGCGGGCA GCCTGTCTCA GCGGGGTCAC CAGCTCCTTC GCCCTTGCCC AGCCTGGATA TCCTGGTGGT CGAAGACGTT GCCCTGAACC GTGAGGTTGC TGGTGGCCTG CTGATGCGCG ACGGTCACCG GGTAAGCTTT GCCGAAGACG CCAGCCAAGC CCTGCAGGCA TGCGCGCAGC GGCGCTTCGA CCTGGTTCTG CTGGACGTGC ACTTGCCGGG CATGAGCGGG GTGGCGTTGT GCCGACAGCT GCGTAGCTCG CCGGGGCCGA ACCGCCACAG TCGGATCCTG GCGCTGACGG CCGGCGTGCA ACCGGGCCAG GTCGCGGGTT ATCTGGACGC TGGTATGCAG GGCGTACTGG CCAAGCCGTT GCGGCTGGAC AGCCTGCGCA AGGCGTTGGC TGACGTAGCG CCCGGTGAAG TGGCCAGCGC TGGCGCAGAC ATGGACTGGT CATTGCTCGA CACCCACCGT TCACTGCTGG GGGAGCAGAA GTTGCAAGGC CTGCTGAAGG TCCTGCGCCA GTCACTGCAG CAGCACGCCA CGGCGCTGGC CGAGGCGCTG CCAGCCCAGG ACTTCACCGA AGTGCTGCAC CTGGCCCACC GCCTGGCTGG CAGTTGCGAT TCCCTGGGGT TTACCGGGCT GGCGACGGTG TTGCGTGGTC TGGAGGAGGC GGCCCGGCAG CATGACGTAC AGGCCATGCA AGCCCTCGGC GAGCCGTTGG CCACCCAGCT AGGTCAGGCC AGTGCCACGC TGGAACAGCT GATTCAGAGC TGA
|
Protein sequence | MIRLHTDGLL RRLLRFILLF SLCFTVLASS VQLYFEYRRE MRDIEARMAL IRAGYLASLE RSLWDLDEAQ LDTQLRGLVD FSDVARVRLV SDDFQLLRGE AEPKGPLRIE RFPLDYQPPS GPARHLGELE VSIDLGAVHH RLYATGLASL LWMGVFLCGL AVALSGLFYR LVTRHLQVMA EFARRIGAGQ WQEPLRLGRR RSSRPDEIDT VANALDDMRR AILSDIERRE RDRLELQDKR DELQAMVERR TASLARAKDE AEAANLAKSR FLATMSHELR TPLNGILGMA ELLRGGRLEV ADRQRVEALY KAGEGLLAIL NEVLYFARLE EGESRAERVV FSLRQLCQEV LALLEPMAME NADTLQLQVD EQLAAYQYGA EQYLRQVLSN LLANAIKFTE HGQVQLTVQV LANNECSQRL RLSVRDNGIG IEPAVQAKIF DRFVQASEAV TQRYGGTGLG LAICKHLVEK LGGSIGLESV QGQGSCFWFE LDMARGQPVS AGSPAPSPLP SLDILVVEDV ALNREVAGGL LMRDGHRVSF AEDASQALQA CAQRRFDLVL LDVHLPGMSG VALCRQLRSS PGPNRHSRIL ALTAGVQPGQ VAGYLDAGMQ GVLAKPLRLD SLRKALADVA PGEVASAGAD MDWSLLDTHR SLLGEQKLQG LLKVLRQSLQ QHATALAEAL PAQDFTEVLH LAHRLAGSCD SLGFTGLATV LRGLEEAARQ HDVQAMQALG EPLATQLGQA SATLEQLIQS
|
| |