| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_3722 |
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| Symbol | alr |
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| ID | 1043924 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | - |
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| Start bp | 4245041 |
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| End bp | 4246270 |
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| Gene Length | 1230 bp |
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| Protein Length | 409 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637147133 |
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| Product | alanine racemase |
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| Protein accession | NP_745855 |
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| Protein GI | 26990430 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0787] Alanine racemase |
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| TIGRFAM ID | [TIGR00492] alanine racemase |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.153642 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.764242 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCCTTTC GCCGTACCCT TCTGGCTGCA TCCCTGGCAC TTCTGATCAC CGGACAGGCC
CCCCTGTATG CGGCACCACC GTTGTCGATG GACAACGGCA CCAACACCCT GACCGTGCAA
AACAGCAATG CCTGGGTCGA AGTCAGCGCC AGCGCCCTGC AGCACAACAT CCGCACGCTG
CAGGCCGAGC TGGCCGGCAA GTCCAAGCTG TGCGCCGTGC TCAAGGCCGA TGCCTATGGC
CACGGTATCG GCCTGGTAAT GCCATCGATC ATCGCCCAAG GCGTGCCCTG CGTGGCGGTG
GCCAGCAACG AGGAGGCCCG CGTGGTCCGC GCCAGTGGCT TCACCGGGCA ACTGGTGCGG
GTACGCCTGG CCAGCCTCAG CGAGCTGGAA GATGGCTTGC AGTACGACAT GGAAGAGCTG
GTGGGCAGCG CGGAATTTGC CCGCCAGGCC GATGCCATCG CCGCGCGCCA TGGCAAGACC
TTGCGCATTC ACATGGCGCT CAACTCCAGC GGCATGAGCC GCAACGGGGT GGAGATGGCC
ACCTGGTCCG GCCGTGGCGA AGCGCTGCAG ATCACCGACC AGAAGCACCT CAAGCTGGTC
GCGCTGATGA CCCACTTCGC CGTGGAAGAC AAGGACGATG TACGCAAGGG CCTGGCGGCA
TTCAACGAGC AGACCGACTG GTTGATCAAG CACGCCAGGC TGGACCGCAG CAAGCTCACC
CTGCACGCCG CCAACTCGTT CGCTACGCTG GAAGTGCCGG AAGCGCGCCT GGACATGGTA
CGAACGGGTG GCGCGCTGTT CGGCGACACC GTGCCGGCGC GCACCGAGTA CAAACGTGCG
ATGCAGTTCA AATCGCACGT GGCGGCGGTG CACAGCTATC CGGCCGGCAA CACCGTGGGC
TATGACCGCA CCTTCACCCT GGCCCGTGAT TCGCGGCTGG CCAACATTAC GGTCGGGTAC
TCCGATGGCT ACCGCCGGGT ATTCACCAAC AAGGGCCATG TGCTGATCAA CGGCCACCGT
GTGCCGGTCG TGGGCAAGGT GTCGATGAAC ACGCTGATGG TCGATGTCAC CGACTTCCCT
GATGTGAAGG GGGGTAACGA AGTGGTGCTG TTCGGCAAGC AGGCCGGGGG CGAAATCACC
CAGGCCGAGA TGGAAGAAAT CAACGGCGCG TTGCTCGCCG ATTTGTACAC CGTATGGGGC
AATTCCAACC CGAAGATACT CGTCGACTGA
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| Protein sequence | MPFRRTLLAA SLALLITGQA PLYAAPPLSM DNGTNTLTVQ NSNAWVEVSA SALQHNIRTL
QAELAGKSKL CAVLKADAYG HGIGLVMPSI IAQGVPCVAV ASNEEARVVR ASGFTGQLVR
VRLASLSELE DGLQYDMEEL VGSAEFARQA DAIAARHGKT LRIHMALNSS GMSRNGVEMA
TWSGRGEALQ ITDQKHLKLV ALMTHFAVED KDDVRKGLAA FNEQTDWLIK HARLDRSKLT
LHAANSFATL EVPEARLDMV RTGGALFGDT VPARTEYKRA MQFKSHVAAV HSYPAGNTVG
YDRTFTLARD SRLANITVGY SDGYRRVFTN KGHVLINGHR VPVVGKVSMN TLMVDVTDFP
DVKGGNEVVL FGKQAGGEIT QAEMEEINGA LLADLYTVWG NSNPKILVD
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