| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_3719 |
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| Symbol | |
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| ID | 1045388 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | - |
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| Start bp | 4241729 |
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| End bp | 4242832 |
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| Gene Length | 1104 bp |
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| Protein Length | 367 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637147130 |
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| Product | periplasmic polyamine-binding protein, putative |
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| Protein accession | NP_745852 |
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| Protein GI | 26990427 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0687] Spermidine/putrescine-binding periplasmic protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0307875 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.343759 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCAAGG TACTGAAGGT GATTGGCGGT CTGCTGCTGG CGTCTGGCGC CAGCCTTGCC
CAGGCGGCAG AGGTGGGCAG CGGTAACACG TTACGGTTGT ACAACTGGAC CGACTACATC
GGTGAAACCA CCCTGGCCGA CTTCGAGAAG GCCACCGGCA TCAAGGTCAT CTACGACACC
TTCGATGGCT ACGAAACCGT GCAGACCAAG CTGCTCACCG GCCGTTCTGG CTACGACCTG
GTCATGCTCA ACGCCTCGCT GGTCCCCCCG CTGATCAGCG CCGGTGTGTT CCAGGCACTG
GACAAGCAGC AACTGCCCAG TTGGCACAAC CTCGACCAGC AGGTGGTGAA CGACCTGCAG
GGCTACGACC CTGGCCTGAA GTATTCGGCG CCCTACACCT GGGGCAGCTC TGGGGTCACC
TACAACGTCG ACAAGATCAC CGCACGCATG CCCGACGCGC CGATCGGTTC GCTGGCCATG
CTGTTCGACC CCAAGATCGT CTCGCGCTTC GCCGACTGCG GTGTCACCCT GATGGACGCG
CCCACTGAGG TCATCCCACT GGCCTTGCAG TACCTGGGCA AGGACCCGCG CAGCGCGTCG
CCGGCCGACC TCAAGGCGGC CGAACAATTG TTGCTGGGCA TCCGCCCTTA CATACGCAAG
TTCGATTCGG TGAATTACCT CACCAGCCTG CCCAACGGCG ATGTCTGCCT GGCGCTGACC
TGGTCCGGTG ACTATGCCAC CGCCCAGGCC CGCGCAGTGG AAGCGAAGAA GGACATCAAA
CTGTCGTTCT TCATCCCCAG GGAAGGTTCG CTGATCTGGT TCGACAACCT GTACATCCCC
AAGGATGCGC CGCACGCGGC CAACGCCCAC CGTTTCATCG AGTTTCTGCT GCAGCCGCAG
ACCATGGCCA AGGTCACCGA CTACATCCAT TACGCCAACA GCAACGCTGC CGCTACCGCG
CTGGTGCGTG ATGACATTCG TCAGGACCCG GCCATCTACC CTGACGCACC CACCCGTGAA
CGCCTGTTCG CGCAGAAAAC CCAGAGCCCC AGGGACATGC GCGCCATCAC CCGGGTCTGG
AGCACGGTCA AGACCGGTTT CTGA
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| Protein sequence | MRKVLKVIGG LLLASGASLA QAAEVGSGNT LRLYNWTDYI GETTLADFEK ATGIKVIYDT
FDGYETVQTK LLTGRSGYDL VMLNASLVPP LISAGVFQAL DKQQLPSWHN LDQQVVNDLQ
GYDPGLKYSA PYTWGSSGVT YNVDKITARM PDAPIGSLAM LFDPKIVSRF ADCGVTLMDA
PTEVIPLALQ YLGKDPRSAS PADLKAAEQL LLGIRPYIRK FDSVNYLTSL PNGDVCLALT
WSGDYATAQA RAVEAKKDIK LSFFIPREGS LIWFDNLYIP KDAPHAANAH RFIEFLLQPQ
TMAKVTDYIH YANSNAAATA LVRDDIRQDP AIYPDAPTRE RLFAQKTQSP RDMRAITRVW
STVKTGF
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