| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_3708 |
|---|
| Symbol | |
|---|
| ID | 1046179 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida KT2440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002947 |
|---|
| Strand | - |
|---|
| Start bp | 4230224 |
|---|
| End bp | 4231261 |
|---|
| Gene Length | 1038 bp |
|---|
| Protein Length | 345 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 637147119 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | NP_745841 |
|---|
| Protein GI | 26990416 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.0970024 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACCAACT ACCGCCCACC CAAGCTGGAT GCTCATAAGC TCTTTGAAAA TGCTTTGACC
TCAATACGTC TAGGCATCGA AGATTTTGAG CTGTCCCAGA AGCGTGAAGG AAGTGGCGAT
CCAGCACGTG CGCTCTCCGC CGTACGTAAT CTCTTCGCTG GTGTGCTGTT GCTGTTCAAG
TACCAGATCA CCACCTGCGT TGATGACCCT GCTGATGCTG CACAGCTAAT CTTCGTCCCG
CCTGAGGTTC TTCCACAAGG AGATGGCTTG GGCGGTGTGG AGTGGCTGCC TTCAGGTAAA
TTCAAAGCTT CAACGATTGA TGTCGCTACG ATAGCTAAAC GCTTCACTTC GTTTTGTATC
GAGGTGGATT GGGACGTCAT CAGAAAGCTT CAAGAGTGTC GCAACCATTT AGAGCACCTC
CATCCAGCTA ACACCCTCGG CGAGGTTGCT GACTTCGTTG CTGAGCTTTT CCCAGTGCTG
CGTGATTTCA TCCAGAACGA GATGGAGATG TCGCCAGTTG AGCTCTTGGG GTCAGCCTGG
GAGTCAATGC TCAATCATCA CCGTTTTGTG AAGACGCTCG CAGACCAGTG TCGAACAGGA
TGGGCTCAGT CGGGCTTACC GAAGCGAATG GAGCTATGGC TTGAAGAGAG TGGGTGCGAG
GAGTGCGGGT CATCGTTGCT AGCACCGGAA AAGGATTCCT TGAAGGCTGG CTGGAAAGTG
GGAACTCACC ACGAGCGGTT CCGTTACATC TGTCTAGCCT GCTCCTATTC TGCGCCTGTT
GCTGATCTAA TGTTGGAAAC ACTGGCAGGG GCACACATCT ATGACCCAAG GGATGGAGGC
GACTGCACTC TAGAGGTCTG TAATGAGTGT GGGTTCGAGG CATATCTAAC ATATCGTCAG
TCTTGTCAGT GGTGTGAAGC TGAGCTGGAG TTTACCCAGT GTGCGATTTG TGAGTCAGGG
CTTGGACAGG GTGATCAGAG AAATGGCGGG CTATGCTCTT ACCACACCTA TGTAGCTGCG
AAAGAAGACG ATGACTGA
|
|---|
| Protein sequence | MTNYRPPKLD AHKLFENALT SIRLGIEDFE LSQKREGSGD PARALSAVRN LFAGVLLLFK
YQITTCVDDP ADAAQLIFVP PEVLPQGDGL GGVEWLPSGK FKASTIDVAT IAKRFTSFCI
EVDWDVIRKL QECRNHLEHL HPANTLGEVA DFVAELFPVL RDFIQNEMEM SPVELLGSAW
ESMLNHHRFV KTLADQCRTG WAQSGLPKRM ELWLEESGCE ECGSSLLAPE KDSLKAGWKV
GTHHERFRYI CLACSYSAPV ADLMLETLAG AHIYDPRDGG DCTLEVCNEC GFEAYLTYRQ
SCQWCEAELE FTQCAICESG LGQGDQRNGG LCSYHTYVAA KEDDD
|
|---|
| |