Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_3676 |
Symbol | |
ID | 1046255 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 4175316 |
End bp | 4177427 |
Gene Length | 2112 bp |
Protein Length | 703 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 637147088 |
Product | hypothetical protein |
Protein accession | NP_745810 |
Protein GI | 26990385 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.116253 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.00772089 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGATGCTTA AATACGAAAT CACTGATGGA TCACTGATCT TCACCTGGAC TGATGACGAG ACACTTAAAG GCTATCGCTA CCGAAAGATG AGCCTCCATT CTTGTGGCGA AACTTGGATA ATCAATGCTA TAGCACAAAT AATATTATCG ATATGCAACC AACTATCCAA AGAAAGCCTA ACGCATTATT TTTATGCAGG CCGCCAAATT TTTGAAGAAT TTAAAAATCA AAGTAAAAAT CTCCCTCCAA GTAGAGACGA CTGGGGGAAC TTTATACTTT GCCACTATGA AAAACATCTC AACCTTACAC ATTCAACGCT TAAAACTCGC ATTAACAGAT GGGCGTTAAT CGCCACCATT TACAAAAGAC TGCAGAGATC AGGTGTAATC CCTGAAGATG TATATATACC TCAAGAACAG CCCTCAGCTG GCTTGCTTGA TGAAAACCTG ACCCTACCAC TTGGCCAGGA AAGAAAGAAC ATCACACCGC CGACAGATTT AAATGATTTC TTATCTAAAC GATACTTAGT TGAATCCGGA TTGAATCTAG CTGAAGACCA ATACCTTCTA GATTTGAAGC GAACTTTAGA ACTCCGCGCC TCAACTGTTT TAAGTTGCGG AATAGATTAC TGGGAGCGAA TGATTAAGTG CCATGAGATG GGACAAAGCC TTATCAGTGA AATAAGCTCT CAAGAATTAG AAAAAGTCCT CGACTGCGGG GACTACTTTA CTGCTGGCCG TCACCTCTGC GCCCCTGATT CACCTAAAGG GATAAATTGG TTTCTAGCGA TCGCTCGGCA TTATTTGAAG CACACAGAAG AGCTGCAAAC ATTAAACTTG AGTGACATCG CCTTGATACC TGCTTTCAAA GATATAATTA GCGATTACAA ATACAGAGAG TCACTTAGCA AGCAAATCAG AACACTTGCA ACTGACTGCC GGACAAAGCC ACTTGAATTT TGGGAAGCCC TTGGCCGACT GTTAGGCTTA CTCTCTCCAA GAGACTGCGC TGTAGCTTGT GCTATTATCG CAACCGAAAA CCCTCGCTTT AACCCTCATT CTCTTGTGAA TGTTAAACTT TATTCCCAAT CTGATAATTT CTATCTTCGC GGAAACTCTG ACACAAAACG TATCACTCTC AGCGTGAGCA AACCGCGAGC ACGGAGCAGA AAGGAATCAG TACTACCTCA TGTGAGTGCC AAGATAGTTA GCTACGTCAT TAAATGCACT GAAATACCAA GAGCGCGGCT ACTGCAAGAC CGAAAATCAG GATGGCGTAA ATTATTTCTA ACATCGACAT CAAAGGGAAC GGCGCGTTTC TCAAATTTCA TAGGTAAACT TAATTCTTCC AAGGGTGTTA CGCTACATCA AATTTACCGT GATAAATTTG AGGCCGCTGG CATCACCCGC GGAGTGCTCA CCCTATTCCG TATTCGATGC ACACAGGGCA TTCTAGAATT TTTACGGAAC GGCAGCATTC AAAGAGTAGC TGACTTACTG GGAAATACAT GCCAAGTTGT AGAGATTTGT TACATCCCTA AGTGGTTAAA ATACCGCTGG GGCACTAGAC TTCTTAGGAT ACTACAACAG AAATTTATTC TCGTAGCAAC TGAAGGTGAA CCTTGGCAAG TTGCGGCATC CGACTTCACT ACAAAAGAGC AAATGCAGGA CTTCATAAGA CAAATTCTCC TTGGACTGAA GAAAGGGGAT CCTCTGAGCG AAGCTATTCG CACTAAATTA GGTCACTATG CCCCGGAAGC CAATTCAATT GTAGAAATGT TTGTGGAACG CGAGCTTCTG TTAAGTCGGA GCCCTATCGG CCTAGCTGCT ATTTATGCAT ACGCAGATGC GGTGGAACTA ATGCCCAAAT CCCAACACTT ACTAATTGAC GCACACACAC AACTCCCCCT CTGGATATAT CCAACTCTAA AAAAACTGAT AATCCAAACT ACAGAAATTG ATTATGAAAA AGCGACGAAT GCCGAAACCT CAATTACCGA TAGAATCTCC AGCGATTCCT TAAGTGAAAT GAAGAAAGTC CATCGCCAAG CATTACAGCT GTCACCAAAA TTTCGAGCAC TTATCGACTT TACTATGGAG CCAGGCGCAT GA
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Protein sequence | MMLKYEITDG SLIFTWTDDE TLKGYRYRKM SLHSCGETWI INAIAQIILS ICNQLSKESL THYFYAGRQI FEEFKNQSKN LPPSRDDWGN FILCHYEKHL NLTHSTLKTR INRWALIATI YKRLQRSGVI PEDVYIPQEQ PSAGLLDENL TLPLGQERKN ITPPTDLNDF LSKRYLVESG LNLAEDQYLL DLKRTLELRA STVLSCGIDY WERMIKCHEM GQSLISEISS QELEKVLDCG DYFTAGRHLC APDSPKGINW FLAIARHYLK HTEELQTLNL SDIALIPAFK DIISDYKYRE SLSKQIRTLA TDCRTKPLEF WEALGRLLGL LSPRDCAVAC AIIATENPRF NPHSLVNVKL YSQSDNFYLR GNSDTKRITL SVSKPRARSR KESVLPHVSA KIVSYVIKCT EIPRARLLQD RKSGWRKLFL TSTSKGTARF SNFIGKLNSS KGVTLHQIYR DKFEAAGITR GVLTLFRIRC TQGILEFLRN GSIQRVADLL GNTCQVVEIC YIPKWLKYRW GTRLLRILQQ KFILVATEGE PWQVAASDFT TKEQMQDFIR QILLGLKKGD PLSEAIRTKL GHYAPEANSI VEMFVERELL LSRSPIGLAA IYAYADAVEL MPKSQHLLID AHTQLPLWIY PTLKKLIIQT TEIDYEKATN AETSITDRIS SDSLSEMKKV HRQALQLSPK FRALIDFTME PGA
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