| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_3666 |
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| Symbol | |
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| ID | 1046296 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | - |
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| Start bp | 4164763 |
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| End bp | 4166097 |
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| Gene Length | 1335 bp |
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| Protein Length | 444 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637147080 |
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| Product | major facilitator transporter |
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| Protein accession | NP_745802 |
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| Protein GI | 26990377 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00883] metabolite-proton symporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.262449 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCAGCA CCACCCTAGA CCCATCCGCC ATCGCCGGCC CCGCACACAA CGCCGAACGC
CAGGCGCTGC GCAAGGCCGC CCGGGCCAGC TTCATGGGCA ACTTCGTCGA GTGGTTCGAC
TACGCCGCCT ACGGCTATCT GGCCACCATC ATCGCCGCCA CCTTCTTCCC GCAAACTGAC
AAGACCACCG GTTTGCTGGC CACCTTTGCG GTATTCGCCC TGTCGTTCCT GGTGCGCCCG
CTGGGTGGCA TCGTCTGGGG CCATTTCGGC GATCGACACG GTCGGCGCAA CGCGCTCTCG
TGGTCGATCC TGATCATGTC GGTATCCACC TTCTGCATCG GCTTGTTGCC GGGCTATGCG
CAGATCGGGC TGTGGGCACC GGCCTTGCTG TTGCTGATCC GCCTGGTACA GGGGTTTTCC
GCCTCGGGTG AGTACGCCGG GGCCGCTGCG TTCCTGGCCG AGTACGCGCC GCCTGGGCGG
CGTGGCTTGT ACACCAGCAT CGTGCCGGCC AGCACGGCGG CGGGGTTGTT GTTCGGTGCG
GCGTTCGTCG CGGTGCTGCA TGAGCTGCTC AGCAGTGAAG CCCTGCATGA GTGGGGCTGG
CGCCTGCCGT TCCTGCTGGC GGCGCCGTTC GGCCTGGTAG GGCGCTATAT CCGCATGAGC
TTGCAGGACA CGCCCAAGTT CCTGGAGATG GAGCAGCGCC TGGAAACCAA GGCCGGCATG
GCCACGACGC CGCTGCGCGA ACTGCTGGGC CAGCACCGGC GCAGTCTGGC AATCGGCATG
GGTGTCACCT GCCTGAATGC GGTTGCGTTC TACCTGTTGC TCAGTTACAT GCCGACCTAC
CTGTCCAGTG AAATGGGCAT GAGCGAGCGG GATTCGTTCA TCGCCTCGAC GGTGTCGCTG
GCCACCTATA TCGGCTTGAT CTTCCTGATG GGGCGGCTGT CCGACCAGTT TGGTCGCAAG
ACCATGCTGG TGGTGGCCTC GCTGTTGTTC CTGGGGTTGA CCGTGCCGTT GTTTCGCCTG
CTGGACGGCC AGCCGCTGCT GGTGATTCTG GCCATCCAGA TCCTTTTCGG TGCGATGCTG
GCGATGAACG ACGGGACCTT GCCGTGCCTG CTGGCCGAAA TCTTTCCGAC CCGGGTGCGC
TTCAGCGGGT TTGCCCTGAG CTTCAATGTG GCCAATGCGC TGTTTGGCGG GACTGCGCCG
TTCATTGCCA CCTGGCTGAT TCAGGTGACG GGCAGCAAGC TGGCCCCGGC AGGATACTTG
CTGGCGGCAG CACTGGTGGC GCTGGTGGCC ATGCTGATGT GTCGGGAGAC GGCGCACGCG
GCCCTTGAAG ATTAG
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| Protein sequence | MSSTTLDPSA IAGPAHNAER QALRKAARAS FMGNFVEWFD YAAYGYLATI IAATFFPQTD
KTTGLLATFA VFALSFLVRP LGGIVWGHFG DRHGRRNALS WSILIMSVST FCIGLLPGYA
QIGLWAPALL LLIRLVQGFS ASGEYAGAAA FLAEYAPPGR RGLYTSIVPA STAAGLLFGA
AFVAVLHELL SSEALHEWGW RLPFLLAAPF GLVGRYIRMS LQDTPKFLEM EQRLETKAGM
ATTPLRELLG QHRRSLAIGM GVTCLNAVAF YLLLSYMPTY LSSEMGMSER DSFIASTVSL
ATYIGLIFLM GRLSDQFGRK TMLVVASLLF LGLTVPLFRL LDGQPLLVIL AIQILFGAML
AMNDGTLPCL LAEIFPTRVR FSGFALSFNV ANALFGGTAP FIATWLIQVT GSKLAPAGYL
LAAALVALVA MLMCRETAHA ALED
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