Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_3665 |
Symbol | |
ID | 1046199 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 4163441 |
End bp | 4164646 |
Gene Length | 1206 bp |
Protein Length | 401 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637147079 |
Product | AraC family transcriptional regulator |
Protein accession | NP_745801 |
Protein GI | 26990376 |
COG category | [K] Transcription |
COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.747363 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.253179 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTTTCGG GGTTCACTGA CGCTCACCTT CTCTGTGCAA TCACTGTCGG CCCTGCCTGC CGGCGGGGCC ATTCCTGGCC GCTGCATCCG GGGTGTATGA TCGACCCGGC AACGACCCAT AACAACAAGA ACCACGCGAG GCTCTGCTTT CTCACTGCCC CTGACCAACC AGGCCTCAGC TTGCACAGGA ACAGCGCAAT GGTCCACCCC GCTTCTGCAA ACCTATCGCC GTCTAGTGTA AAGAATTGTT CGGCAAAGAC CTTTGGCTTC CTGATTTTGC CCAATTTCAC CACCATCGGC CTTGCGTCGG CGGTGGAGAC CCTGCGCATG GCCAACCTGG CCGCGCGCAA GCCACTGTAT CGCAGTGTGC TGATCGCCGC AGACGACGCG CCGGTGGTGG CCAGCAACGG CATGCGCGTA CTGCCCGACT ACAACATCAC CAACGCCCCC GCGCTGGATG CCTTGCTGGT GGTCGGCGCC AACCCGATCG ACCGAAGCCG TAGCAACCGC CCATTGATCG ACTGGTTGCG CCAACTGGCC CGCCAGCGCT TGCCACTGGG CGGTATCTGC ACCGGTAGCT ACCTGCTGGC CAAGGCCGAA TTGCTCAAAG GCTACCGCTG CACCATCCAC TGGGAAGACC TGCCGACGTT GCAGGCGCAC TTCCCCGGTA TCGTGATCTC CAGCCAGCTG TTCGAACTGG ACCGCGACCG TTACACCTGC TCAGGCGGCG TGGCGGCCAT GGACATGATG TTGCAACTGG TGGCCCGCGA CACGGGCGGC CAGGACATCG CGGCCAAGGC CGCCGAGCTG TTGCTGTGCG ACCGCGTACG CGGTGAGCGT GAGCGCCAGC GTGTGCCGCT GCGCACCCTG CTCGGCAGCG CTCAGCCCAA ACTGAGCCAG GTGGTGGCGA TCATGGAGGC CAATCTGGAG GAGCCGCTGG GGCTGGAGGA ACTGGCCAGC CTCAACGACG TGACCGTGCG CCAATTGGAG CGGCTGTTCC ACAAGTACCT GCAGCGCACG CCCAGCCAGT ATTACCTGGA GCTGCGGCTG TCGCGGGCGC GGGAGTTACT GCTGCGCAGC GACGTGCAAG TGCGTGAGGT AGCGCTGGCC TGTGGCTTCA GTTCGCCTGC GCATTTTTCC AAGAGTTATA GCCGGTTCTT CGGGCTGTCG CCTTTAGGGG AGCGGCGGCA GGCCTCTCTC CACTGA
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Protein sequence | MVSGFTDAHL LCAITVGPAC RRGHSWPLHP GCMIDPATTH NNKNHARLCF LTAPDQPGLS LHRNSAMVHP ASANLSPSSV KNCSAKTFGF LILPNFTTIG LASAVETLRM ANLAARKPLY RSVLIAADDA PVVASNGMRV LPDYNITNAP ALDALLVVGA NPIDRSRSNR PLIDWLRQLA RQRLPLGGIC TGSYLLAKAE LLKGYRCTIH WEDLPTLQAH FPGIVISSQL FELDRDRYTC SGGVAAMDMM LQLVARDTGG QDIAAKAAEL LLCDRVRGER ERQRVPLRTL LGSAQPKLSQ VVAIMEANLE EPLGLEELAS LNDVTVRQLE RLFHKYLQRT PSQYYLELRL SRARELLLRS DVQVREVALA CGFSSPAHFS KSYSRFFGLS PLGERRQASL H
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