Gene PP_3665 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_3665 
Symbol 
ID1046199 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp4163441 
End bp4164646 
Gene Length1206 bp 
Protein Length401 aa 
Translation table11 
GC content64% 
IMG OID637147079 
ProductAraC family transcriptional regulator 
Protein accessionNP_745801 
Protein GI26990376 
COG category[K] Transcription 
COG ID[COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.747363 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.253179 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTTCGG GGTTCACTGA CGCTCACCTT CTCTGTGCAA TCACTGTCGG CCCTGCCTGC 
CGGCGGGGCC ATTCCTGGCC GCTGCATCCG GGGTGTATGA TCGACCCGGC AACGACCCAT
AACAACAAGA ACCACGCGAG GCTCTGCTTT CTCACTGCCC CTGACCAACC AGGCCTCAGC
TTGCACAGGA ACAGCGCAAT GGTCCACCCC GCTTCTGCAA ACCTATCGCC GTCTAGTGTA
AAGAATTGTT CGGCAAAGAC CTTTGGCTTC CTGATTTTGC CCAATTTCAC CACCATCGGC
CTTGCGTCGG CGGTGGAGAC CCTGCGCATG GCCAACCTGG CCGCGCGCAA GCCACTGTAT
CGCAGTGTGC TGATCGCCGC AGACGACGCG CCGGTGGTGG CCAGCAACGG CATGCGCGTA
CTGCCCGACT ACAACATCAC CAACGCCCCC GCGCTGGATG CCTTGCTGGT GGTCGGCGCC
AACCCGATCG ACCGAAGCCG TAGCAACCGC CCATTGATCG ACTGGTTGCG CCAACTGGCC
CGCCAGCGCT TGCCACTGGG CGGTATCTGC ACCGGTAGCT ACCTGCTGGC CAAGGCCGAA
TTGCTCAAAG GCTACCGCTG CACCATCCAC TGGGAAGACC TGCCGACGTT GCAGGCGCAC
TTCCCCGGTA TCGTGATCTC CAGCCAGCTG TTCGAACTGG ACCGCGACCG TTACACCTGC
TCAGGCGGCG TGGCGGCCAT GGACATGATG TTGCAACTGG TGGCCCGCGA CACGGGCGGC
CAGGACATCG CGGCCAAGGC CGCCGAGCTG TTGCTGTGCG ACCGCGTACG CGGTGAGCGT
GAGCGCCAGC GTGTGCCGCT GCGCACCCTG CTCGGCAGCG CTCAGCCCAA ACTGAGCCAG
GTGGTGGCGA TCATGGAGGC CAATCTGGAG GAGCCGCTGG GGCTGGAGGA ACTGGCCAGC
CTCAACGACG TGACCGTGCG CCAATTGGAG CGGCTGTTCC ACAAGTACCT GCAGCGCACG
CCCAGCCAGT ATTACCTGGA GCTGCGGCTG TCGCGGGCGC GGGAGTTACT GCTGCGCAGC
GACGTGCAAG TGCGTGAGGT AGCGCTGGCC TGTGGCTTCA GTTCGCCTGC GCATTTTTCC
AAGAGTTATA GCCGGTTCTT CGGGCTGTCG CCTTTAGGGG AGCGGCGGCA GGCCTCTCTC
CACTGA
 
Protein sequence
MVSGFTDAHL LCAITVGPAC RRGHSWPLHP GCMIDPATTH NNKNHARLCF LTAPDQPGLS 
LHRNSAMVHP ASANLSPSSV KNCSAKTFGF LILPNFTTIG LASAVETLRM ANLAARKPLY
RSVLIAADDA PVVASNGMRV LPDYNITNAP ALDALLVVGA NPIDRSRSNR PLIDWLRQLA
RQRLPLGGIC TGSYLLAKAE LLKGYRCTIH WEDLPTLQAH FPGIVISSQL FELDRDRYTC
SGGVAAMDMM LQLVARDTGG QDIAAKAAEL LLCDRVRGER ERQRVPLRTL LGSAQPKLSQ
VVAIMEANLE EPLGLEELAS LNDVTVRQLE RLFHKYLQRT PSQYYLELRL SRARELLLRS
DVQVREVALA CGFSSPAHFS KSYSRFFGLS PLGERRQASL H