| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_3663 |
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| Symbol | |
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| ID | 1044765 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | - |
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| Start bp | 4160751 |
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| End bp | 4162052 |
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| Gene Length | 1302 bp |
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| Protein Length | 433 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637147077 |
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| Product | GGDEF domain-containing protein |
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| Protein accession | NP_745799 |
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| Protein GI | 26990374 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.241866 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATATTGC TGCCCACGGC CCTTTGTCAG GGGCTGGATT ACAATGTGCA GGCAACAGTG
CAAGGCCCCT CTGAACGTGA TCACGATCGC ATACAGTCGG GCCTTTTCCC GTTAACCAGA
CAGGCCAATG CGTATATGGC GTTAGATCCA CCCACGATGC TGACTATTTC AGTCGCTTTG
GCCGCTGCGG CCGCCTTGTA CCTGGCGATT GAATGGCGCA GTGTGCGCGA AACCTCATTG
CTGTACTGGA GTGCGGGTTT CGCCACGATT ACGGTTGGTA GCACCCTGGC ATTGTTGCGC
GGGATCGGCT TGCTGTTCAT CGGTATCTGG TTCGCCAATG GCTTGCTGGT GGTGGCCCAC
GTTTTTTTCC TGATCGGCGT GCTGCGCTTC ACTCAGGAGC GCTTGTCACG TGCCTGGTTG
ATGATCGTGC TGGTCTGGTT CGCCTTGCTG CTGCTGCCCG TGGGCCCGCA GTGGTCGAAG
GTGATGCTGA TGGTCAACTC GTTGTTGGTG GCCTCGCTGA CGCTCAAGGC CAGTTTCCTG
CTGCGGCCAC ATGGCAAATC GCTGAGTGTC GGGGCCGTGC AACTGCGCTA TGTGTTGCTG
ATCCATGGGC TGTTCTATGT GGCCAAGGCG GCCATCGCGA TCACGCCAGG CACGCTGATT
GACCTGGCGA CCTTTGGCGG GCTGATCATT CAGGTTTCGC TGGTGGAAGG CGCGATGGCG
ATCATGCTGA TTGCCTTGTC GATGACCGGC ACCGTACGTT ACCGGCGGGA AGAGCGGATT
GCCCGGCTGG CAGCTCGTGA CCCGCTGACT GCGCTGTACA ACCGGCGTGC ACTGGAGGTG
CGGGCGGGGC ATTTCTTCAA GGACGTGAGC CCGGCGCAAC CCGGGGCATT GCTGTTGATC
GACATCGACA ACTTCAAACT GGTCAACGAC CTGCACGGGC ATATCGCCGG CGACCGTTTG
CTGATTGCCT TGAGCGAGAT GATTCGTACG GCGCTGCCCG AGCGCTCGCT GGCGGCGCGG
TTGGGCGGGG ATGAGTTCGT CATCTTGCTC AGTGGCGCGA GCAGTGAACG GGTCATGGAA
CTGGGGAGTG GGCTGCGTGA GCAGTTCCAG CAGTACGCCG ACAAGACTGT GCCTACGCCC
CAGGCGGTTA CCTTGAGCAT TGGTGCCAAC GTGTTCGATC AGCCGCCGGC GAGCCTGGCG
GCGTTGATCG AGCAGGGGGA TGTGGCGTTG TACCAGTCCA AACGTGGGGG GCGCGACAGC
ATTCGGTTTT TCGAGCGGGC GGTGGTTGAA CTCCGGCAGT GA
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| Protein sequence | MILLPTALCQ GLDYNVQATV QGPSERDHDR IQSGLFPLTR QANAYMALDP PTMLTISVAL
AAAAALYLAI EWRSVRETSL LYWSAGFATI TVGSTLALLR GIGLLFIGIW FANGLLVVAH
VFFLIGVLRF TQERLSRAWL MIVLVWFALL LLPVGPQWSK VMLMVNSLLV ASLTLKASFL
LRPHGKSLSV GAVQLRYVLL IHGLFYVAKA AIAITPGTLI DLATFGGLII QVSLVEGAMA
IMLIALSMTG TVRYRREERI ARLAARDPLT ALYNRRALEV RAGHFFKDVS PAQPGALLLI
DIDNFKLVND LHGHIAGDRL LIALSEMIRT ALPERSLAAR LGGDEFVILL SGASSERVME
LGSGLREQFQ QYADKTVPTP QAVTLSIGAN VFDQPPASLA ALIEQGDVAL YQSKRGGRDS
IRFFERAVVE LRQ
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