| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_3662 |
|---|
| Symbol | |
|---|
| ID | 1046470 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida KT2440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002947 |
|---|
| Strand | + |
|---|
| Start bp | 4159257 |
|---|
| End bp | 4160630 |
|---|
| Gene Length | 1374 bp |
|---|
| Protein Length | 457 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637147076 |
|---|
| Product | decarboxylase family protein |
|---|
| Protein accession | NP_745798 |
|---|
| Protein GI | 26990373 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1611] Predicted Rossmann fold nucleotide-binding protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.358077 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.251066 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCTCAAC GCCATGTCAT CAATGCATCC GTCAGCCCCA AAGGCAGCCT GGAGACGCTG
TCACAACGTG AAGTGCAGCA ACTGAGTGAA GTCGGTACCG GTAGCCTCTA CACACTGTTC
CGCCAGTGCG CCCTGGCAAT CCTCAACACC GGCGCCCATG TCGACAATGC CAAGACTATC
CTTGAGGCCT ACAAAGACTT CGAGGTGCGT ATCCACCAAC AGGACCGCGG CGTGCGCCTG
GAGCTGCTGA ACGCCCCGGC CGACGCCTTC GTCGATGGCG AAATGATCGC CAGCACCCGT
GAAATGCTGT TCAGCGCCTT GCGCGACATC GTCTACACCG AAAGCGAGCT GGCCAGCCAG
CGCATCGACC TGGAAAGCTC CCAGGGCATC ACCGACTACG TTTTCCACCT GCTGCGCAAC
GCGCGCACCC TGCGCCCAGG CGTGGAGCCG AAGATGGTGG TGTGTTGGGG CGGCCACTCG
ATCAGCACCG AGGAATACCA GTACACCAAG AAGGTCGGCC ATGAACTGGG CCTGCGCAAG
CTGGATGTCT GCACCGGCTG CGGCCCGGGC GTGATGAAAG GCCCGATGAA GGGCGCCACC
ATCGCCCACG CCAAGCAACG CATGCATGGC AGCCGCTACC TGGGCCTGAC CGAGCCCGGC
ATCATCGCCG CCGAGGCGCC CAACCCGATC GTCAACGAAC TGGTGATCCT GCCAGACATC
GAGAAGCGCC TGGAGGCCTT CGTGCGTGTC GGCCACGGCA TCATCATCTT CCCGGGCGGT
GCCGGCACGG CGGAGGAGTT CCTGTACCTG CTGGGCATCC TCATGCACCC GGACAACCAC
GACCTGCCGT TCCCGGTGGT GCTCACCGGC CCGCGCAGCG CCGAGCCTTA TCTGCAACAG
TTGCACGCTT TCGTCGGCGC CACGCTGGGT GAAGCGGCCC ATCGCCTGTA CGAAATCATC
ATTGATGACC CGGCGGAAGT CGCCCGGCAC ATGGTCGAAG GCCTCAAAGC GGTCAAGCAG
TTCCGCCGCG AGCGCAACGA TGCCTTCCAC TTCAACTGGC TGCTGAAGAT CGAGGAGAGC
TTCCAGCGAC CGTTCGACCC GACCCACCAG GCCATGGCCG ACCTGGACTT GCGCCGCGAG
CTGCCGCCCC ATGAACTGGC GGCCAACCTG CGCCGGGCGT TTTCCGGGAT TGTCGCAGGC
AACGTCAAGG ACAAAGGCAT CCGCCTGATC GAGGAACACG GGCCGTATCA GATCCACGGT
GACAGCGCCG TACTGGACCC GCTGGGCCGG CTGCTGCAGG CATTCGTCGA CCAGCACCGG
ATGAAGCTGC CCGGCGGCGC GGCGTATGTA CCGTGCTATC AGGTGGCAAC CTGA
|
|---|
| Protein sequence | MPQRHVINAS VSPKGSLETL SQREVQQLSE VGTGSLYTLF RQCALAILNT GAHVDNAKTI
LEAYKDFEVR IHQQDRGVRL ELLNAPADAF VDGEMIASTR EMLFSALRDI VYTESELASQ
RIDLESSQGI TDYVFHLLRN ARTLRPGVEP KMVVCWGGHS ISTEEYQYTK KVGHELGLRK
LDVCTGCGPG VMKGPMKGAT IAHAKQRMHG SRYLGLTEPG IIAAEAPNPI VNELVILPDI
EKRLEAFVRV GHGIIIFPGG AGTAEEFLYL LGILMHPDNH DLPFPVVLTG PRSAEPYLQQ
LHAFVGATLG EAAHRLYEII IDDPAEVARH MVEGLKAVKQ FRRERNDAFH FNWLLKIEES
FQRPFDPTHQ AMADLDLRRE LPPHELAANL RRAFSGIVAG NVKDKGIRLI EEHGPYQIHG
DSAVLDPLGR LLQAFVDQHR MKLPGGAAYV PCYQVAT
|
|---|
| |