Gene PP_3661 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_3661 
Symbol 
ID1046202 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp4157987 
End bp4159048 
Gene Length1062 bp 
Protein Length353 aa 
Translation table11 
GC content65% 
IMG OID637147075 
Producthypothetical protein 
Protein accessionNP_745797 
Protein GI26990372 
COG category[S] Function unknown 
COG ID[COG2855] Predicted membrane protein 
TIGRFAM ID[TIGR00698] conserved hypothetical integral membrane protein 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.143776 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCACGG TTCCGTCCAA CCCCGCCTTT GCCCCTACCC TCTCCACCCG AGGGCGGCTC 
AATGGGATTC TCTTCGTCGC GCTGTTCGCG GTCGCAGTCA CGCAACTGGC GGCCATGCCC
GCTATCGCCA ACCTGGGCAT CAGCCCGCTG ATCGTGGGTA TCGTCGCAGG TGCCTTGTAT
GGCAACGCGC TGCGTGACGG CGTACCGGCA AGCTGGGCGG CAGGCATCAA TTTTTCCGCT
CGCGGCCTGT TACGCATTGC TGTGGCATTT TTTGGCCTGC GGGTAAGCCT GCAGGAAATT
GCCGAAGTCG GCTGGTCGGG GCTTATCGTG TCGGTGCTGG TAGTCACCAG TACCCTGCTG
ATCGGCCTGT GGTGTGGCAT GAAAGTGTTC AAGCTCGACC GCGATACCGC CTTGCTGACC
GCCGCCGGCA GCGCCATCTG CGGCGCCGCC GCCGTGCTGG CATTCGAATC GGCGCTGCGC
AGCGCCCCCC ATAAAAGCGC CATGGCAGTC GGAAGCGTAG TGCTGTTCGG TACCTTGTCG
ATGTTCCTTT ACCCACTGGC GATCAATGCC GGCTGGCTGC ATCTGGATAC CATGGGCGCC
GGGCTGCTGC TGGGCGGCAC TGTCCACGAA GTGGCGCAGG TGGTAGGCGC GGCCAGCAAT
GTCAGCCCCG AAGCCACGCA TGTCGCCACC ATCGTCAAGA TGACCCGGGT CATGCTGCTG
GTGCCGGTAC TGCTGGTGGT GGGCCTGTGG ATCAGCCGTT CGCGCAAGGC AGGCCAGGCG
CAGGGCAACG GGCGCATTGC CATGCCCTGG TTCGCTTTCG GCTTCCTGGC CCTGGTCCTG
GTGAATTCGA TGCAAGTGCT GCCTGGCAGC GTGACCCAGG CCGTGAACAG CCTGGACACC
TTTGCCTTGA CCATGGCCAT GACGGCGTTG GGCATGGAGA CCCGCTTCAG CCAGATTCGC
CAGGCTGGGC CACGGGCGCT GGCCACCGGT GCGATCCTCA ACCTGTGGCT GGTTGGCGGG
GGGCTGGCGA TTACCCTGGG GGTGCAGAAG CTGTTGGGCT GA
 
Protein sequence
MATVPSNPAF APTLSTRGRL NGILFVALFA VAVTQLAAMP AIANLGISPL IVGIVAGALY 
GNALRDGVPA SWAAGINFSA RGLLRIAVAF FGLRVSLQEI AEVGWSGLIV SVLVVTSTLL
IGLWCGMKVF KLDRDTALLT AAGSAICGAA AVLAFESALR SAPHKSAMAV GSVVLFGTLS
MFLYPLAINA GWLHLDTMGA GLLLGGTVHE VAQVVGAASN VSPEATHVAT IVKMTRVMLL
VPVLLVVGLW ISRSRKAGQA QGNGRIAMPW FAFGFLALVL VNSMQVLPGS VTQAVNSLDT
FALTMAMTAL GMETRFSQIR QAGPRALATG AILNLWLVGG GLAITLGVQK LLG