| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_3652 |
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| Symbol | |
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| ID | 1046493 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | - |
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| Start bp | 4148120 |
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| End bp | 4148752 |
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| Gene Length | 633 bp |
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| Protein Length | 210 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637147066 |
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| Product | amino acid transporter LysE |
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| Protein accession | NP_745788 |
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| Protein GI | 26990363 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1280] Putative threonine efflux protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0913574 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCGAAG CCACGCAACT GCTCACGTTC GCCCTGATTT GCCTCGGCAT GGTCCTGACC
CCAGGGCCGA ACATGATCTA CCTGATTTCC CGCTCGATCT GTCAGGGCCG CCAAGCCGGG
TTGATTTCGC TTGGCGGTGT GGCTCTGGGC TTCGTCATCT ACATGTTCTG CGCGGCAATG
GGCATCACGG CGCTGGTGAT GGCAGTACCC TTTGCCTACG ACGCGCTGCG CATCGGTGGC
GCGCTGTACC TGTTGTACCT GGCCTGGCAG GCGCTGCGGC CGGGTGGCCA ATCGCCGTTC
CAGCTCCGTG AACTGCCCGC CGACAGCCCG CGGCGGCTAT TCACCATGGG GTTTGCCACC
AGCCTGCTCA ACCCCAAGAT TGCCGTCATG TACCTGTCGC TCATGCCGCA ATTCATCGAA
CCGGGCCACG GCAGCGTGCT GTTGCAGTCG CTGGTGCTGG GTTCGACGCA GATCGCCATC
AGCGTTACGG TCAACGCGCT GATTACGATC ATGGCCGGTT CCATCGCCGT GTTCCTGGCT
GGCAGGCCGC TGTGGCAACA GGTTCAGCGT TGGTTGATGG GAACGGTGCT GGCGGGGCTG
GCGGTGCGCA TGCTGGCAGA AGGGCGCCGT TGA
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| Protein sequence | MPEATQLLTF ALICLGMVLT PGPNMIYLIS RSICQGRQAG LISLGGVALG FVIYMFCAAM
GITALVMAVP FAYDALRIGG ALYLLYLAWQ ALRPGGQSPF QLRELPADSP RRLFTMGFAT
SLLNPKIAVM YLSLMPQFIE PGHGSVLLQS LVLGSTQIAI SVTVNALITI MAGSIAVFLA
GRPLWQQVQR WLMGTVLAGL AVRMLAEGRR
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