| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_3649 |
|---|
| Symbol | |
|---|
| ID | 1046489 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida KT2440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002947 |
|---|
| Strand | + |
|---|
| Start bp | 4144444 |
|---|
| End bp | 4145196 |
|---|
| Gene Length | 753 bp |
|---|
| Protein Length | 250 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637147063 |
|---|
| Product | GntR family transcriptional regulator |
|---|
| Protein accession | NP_745785 |
|---|
| Protein GI | 26990360 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1802] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.078478 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.168934 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACGCC AGCCACTCGA CGACAGCTTC AAGGTCAACC GCAACCCCGT TACTCTGCGC
GAAATCGTGC TCGACAAGCT GCGCACCGCA ATCATGAACT TTCACCTGTT GCCCGGCGAC
CGCCTGGTCG AGCGCGACCT GTGCGACCGC CTCGGCGTCA GCCGCACTTC GGTACGTGAA
GCGCTGCGTC ACCTGGAGTC CGAAGGCCTG GTCGAGTTCG CCGACGCCAA AGGCCCGCGC
GTGGCCATCA TCACCCTGGA AGACGCACGT GACATCTATG AGCTGCGCTG TGTGCTCGAA
GGCCTGATCG TGCAACTGTT CACCCTCAAC GCCAAGGCCA AGGACATCCG TGCGCTGGAA
CGCGCGCTGG AAGTGAACCG CGAAGCACTG GAAGAAGGCG AGTTGCAACA GGTGCTGGAC
TCGGTACAAG GTTTCTACGA TGTGCTGCTG GAAGGCTCTG GCAACCAGGT GGCGGCCCAG
CAGCTGCGCC AGTTGCAAGC ACGCATCAGC TACCTGCGCG CCACCTCGGT ATCGCAGGAA
AACCGCCGCG GCGCCAGCAA CCGCGAAATG GAAAAGATCG TCGAGGCCAT CAAGGGCGGC
GACCCGCTGG TGGCCCACCA GGCCTCGGTC GACCACGTCC GCGCCGCCGC CAAGGTGGCC
CTGGACTACC TGCGCCAGAA GCAGGATGAC AACGCCAAGG TGCGCGACAT TGTCGAACCC
TTGGCCCTGA AGGAACCCCG CATAGGTCGC TGA
|
|---|
| Protein sequence | MKRQPLDDSF KVNRNPVTLR EIVLDKLRTA IMNFHLLPGD RLVERDLCDR LGVSRTSVRE
ALRHLESEGL VEFADAKGPR VAIITLEDAR DIYELRCVLE GLIVQLFTLN AKAKDIRALE
RALEVNREAL EEGELQQVLD SVQGFYDVLL EGSGNQVAAQ QLRQLQARIS YLRATSVSQE
NRRGASNREM EKIVEAIKGG DPLVAHQASV DHVRAAAKVA LDYLRQKQDD NAKVRDIVEP
LALKEPRIGR
|
|---|
| |