Gene PP_3643 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_3643 
Symbol 
ID1046437 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp4138498 
End bp4138983 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content62% 
IMG OID637147057 
Productoxidoreductase, putative 
Protein accessionNP_745779 
Protein GI26990354 
COG category[R] General function prediction only 
COG ID[COG1853] Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0302568 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0898299 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGACG CAACTGTCTA CAAGAACGTT CTGGGCTCCT TCCCGTCCGG CGTTACCGTC 
ATCACCACCC AGGACGACGA CGGCTCGGTC GTCGGCCTGA CCGCCAGCGC CTTCTCCTCC
CTGTCGATGG ACCCGCCGCT GGTGCTGTTC TGCCCCAACT ACACCTCCGA CTCCTACCCG
GTACTGATCA AGCAGAAGCG CTTTGCCATT CACCTGCTGT CCGGTGAACA GCAGGCCGAA
GCCTACGCGT TCGCCAAGAA GGGCAAGGAC AAGGCCAGCG GCATCGAGTG GAGCCTGAGT
GAACTGGGCA ATCCGATCCT GGCCGGTGCC ACCGCCGTCA TCGAATGCGA ACTGTGGCGT
GAATATGAAG GTGGCGACCA CGCCATCATG GTCGGCAAGG TGCACAACCT GATCGTCCCG
GCAGAAGCAC CACGGCCCAT GGTGTACTGC CGCGGCAAGA TGGCCAGCCT GCCGGCCTTT
GCCTGA
 
Protein sequence
MIDATVYKNV LGSFPSGVTV ITTQDDDGSV VGLTASAFSS LSMDPPLVLF CPNYTSDSYP 
VLIKQKRFAI HLLSGEQQAE AYAFAKKGKD KASGIEWSLS ELGNPILAGA TAVIECELWR
EYEGGDHAIM VGKVHNLIVP AEAPRPMVYC RGKMASLPAF A