| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_3632 |
|---|
| Symbol | |
|---|
| ID | 1045920 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida KT2440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002947 |
|---|
| Strand | - |
|---|
| Start bp | 4128345 |
|---|
| End bp | 4129223 |
|---|
| Gene Length | 879 bp |
|---|
| Protein Length | 292 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 637147046 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | NP_745768 |
|---|
| Protein GI | 26990343 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.486007 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGCGCGAAA TCAGCCTCGA CCGCCTCCGC ACATTGGTGG TCATCACCGA CCTGGGCTCC
TTTGCCGAGG CCGCCCGCCA GCTTAACCTG GCGCCGCCCA CCATCAGCTT GCACGTGGCC
GAGCTGGAGG CGCGTATTGG CGCCCCGTTG CTCACCCGCA CCCGTGGCCA GGTGCGGCCT
ACCGTCATCG GTGAAACACT GCTGGGGCGT GCCCGACGCC TGCTGGCGGA CGCTGACTTG
GCGCTGGACG AAGTGCGCCG GCAGGTCGCA GGGTTGACCG GACGTGTGCG CCTGGGCGCC
TCCACCGGTG CCATCGCCCA TTTGCTGCCG CAGGCGCTGG CGCGCCTGCG TGTGGAGCAC
CCGGGGATCG ATGTGCAGGT CCAGGTGCTG ACCTCTCAGG CGTCGCTCGT GCGCTTGCGT
GAGGGCACAC TGGATATCGG CCTTGTGGCC TTGCCACAGG TGGTCGGCAA AGGGCTGACG
GTCACCCCCT GGCGGCGCGA CCCGATCCTG GCGTATGTGC CGGCCGACTG GCAGCCACCG
GCCAGGATCA CCCCGGCCTG GCTGGCGCAA CGGGCGTTGA TTCTCAACGA CAGCACCACC
CAGCTGTCGC GGGTTACCGG CGAGTGGTTT GCAGCGGCGG GGTTGTACCC CGAACCGCGG
ATCGAGCTGA ACTACAACGA TGCGATCAAG AGCCTGGTCG GCGCCGGGTA CGGGGCGACA
TTGTTGCCGC AGGAGGGGGA GGCGACCGAG CTGGACCGGC GCATTGCCCG CCGACCGCTG
CGGCCGGGGT TGTGGCGGCA GTTGGGTATT GCGTGTCGGG AAGGGCAGGT GGAGCGGGCC
ACGGGGTATG TGCTGGAGGC GCTGGAACGG TTGCGGTAG
|
|---|
| Protein sequence | MREISLDRLR TLVVITDLGS FAEAARQLNL APPTISLHVA ELEARIGAPL LTRTRGQVRP
TVIGETLLGR ARRLLADADL ALDEVRRQVA GLTGRVRLGA STGAIAHLLP QALARLRVEH
PGIDVQVQVL TSQASLVRLR EGTLDIGLVA LPQVVGKGLT VTPWRRDPIL AYVPADWQPP
ARITPAWLAQ RALILNDSTT QLSRVTGEWF AAAGLYPEPR IELNYNDAIK SLVGAGYGAT
LLPQEGEATE LDRRIARRPL RPGLWRQLGI ACREGQVERA TGYVLEALER LR
|
|---|
| |