| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_3629 |
|---|
| Symbol | |
|---|
| ID | 1045222 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida KT2440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002947 |
|---|
| Strand | - |
|---|
| Start bp | 4125348 |
|---|
| End bp | 4125827 |
|---|
| Gene Length | 480 bp |
|---|
| Protein Length | 159 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637147043 |
|---|
| Product | 3-demethylubiquinone-9 3-methyltransferase |
|---|
| Protein accession | NP_745765 |
|---|
| Protein GI | 26990340 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3865] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.481282 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTGCCA AGAACACCAT CTGCCTGTGG TACGACCACG ATGCCGAAGA GGCGGCGAAC
TTCTACGCCC GAACTTTCCC CGATAGCCGG GTTGTCGCTG TGCACCAGGC TCCCGCCGAT
TACCCTTCAG GCAAGCAGGG CGATGTGATC ACCGTGGAAT TCACGGTAAT GGGTATCCCT
TGCGTGGGCC TCAATGGTGG CCCGGCCTTC AAGCACTGTG AGGCATTTTC GTTCCAGGTC
AGTACCGCGG ACCAGGCAGA GACCGACCGC TTGTGGGATG CCATTGTCGG TAACGACGGC
GAGGCCAGCG TTTGCGGCTG GTGCAGGGAC AAATGGGGGA TTTCGTGGCA GATCACTCCA
CGCATCCTCA TCGAAGCCAT CGGCCACCCC GACCGTGCGG CGGCCAAGCG TGCGTTCGAG
GCCATGATGC AGATGGGCAA GATCGATGTG GCCAAGATAG CGGCGGCGTT GGAAGGTTGA
|
|---|
| Protein sequence | MTAKNTICLW YDHDAEEAAN FYARTFPDSR VVAVHQAPAD YPSGKQGDVI TVEFTVMGIP
CVGLNGGPAF KHCEAFSFQV STADQAETDR LWDAIVGNDG EASVCGWCRD KWGISWQITP
RILIEAIGHP DRAAAKRAFE AMMQMGKIDV AKIAAALEG
|
|---|
| |