Gene PP_3616 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_3616 
Symbol 
ID1045589 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp4108175 
End bp4111165 
Gene Length2991 bp 
Protein Length996 aa 
Translation table11 
GC content61% 
IMG OID637147030 
Producthypothetical protein 
Protein accessionNP_745752 
Protein GI26990327 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAATG CCTCCGTCAG TAGCGCCACC TCCGGCCCTG CCTGCAGCGC TCGCGTGCCC 
ATCCTGCCAG TGCGCTACGC CATCGTGCCC CGCACTGCCG ACGCCCCCGC CTGCCGCTAT
GCCGATGCAG GCTTCAACCT GGAACAAGGC TTCCCCACGC TGCAGCACTC GGCCTACACC
CTCCGCGCTT TGCGCCCGGG CTATGTCTAC GTGTTCATGA AAGGCCCTCA GGGCGAAAAG
CTGGTCATTC ACGAGTACGT CGGCGCGGGC CTCTACAAGG AGCTGCGCTA TCAAGGGCTG
GAGGACTACC ACCGCCGTGA GCGCTACCTG TCCGGCCAGA GCACCGGCTG GGTGTGGGCC
GACACCTGCC AGGACACCGC CGAGGAAGTG TGGATCGGCT ACAGCCCGCA CCTGTGGACC
AACGCCATCA CCGCCCGTAT CACTGGTTCG GCAGCCCTGC GCAAACGGCA CATGCGCCAG
CTGGACATGG CCGAGCTGGT GAGCGGCAAC CAGGCGCCGT CCACCCAGCC CCATGTGTTG
CCAGTGAGTG CCCTGCAAAC CTGGGTCGAA GACTTCAAGC CAACCGAGCG GCGCATGCCG
CTGACCTGGA GCAGCGACCC GGTCACCGAA ACCTTGCCCA TCGGCAACCT CCATGCCATC
GCCCGGCACT ACCCCTGGAC CCAGCCGAAA GTGCCAGTGG TGGTGGCGCT CGCCGACGCC
GAAGGCATGG CCCTGGACCT GAGCCTGTCT GTCTCGGCCT ACCAGCATCA ACTGCGTGAC
CTGATGCCGG CCGAGCAACT GGAGCACACA AAACCTGCCC AACCTCCCGA GCAGGAGCGC
GTGCCGGCAT GCTACCGGCT GGATGCCGAA CAGCTCAGCC CGCAGAGCCG CGACTTTCAC
CATCGCAACC TGGTCGCCAT GTTGCTGAAC AAGACGCTGG AAAGCCTGTA CCCGGCGGAT
GCCCCTTCGC CGGAACTGGC CGCGTTCAGG CTGGGCACGT CACGCCGGGG GCCCGCCCTG
TCGCCGGCCG AGTCACATTT CCAGGCCCTC ACCCATGAAG ACTATTCCCC CAATGGTGCG
CGCCTGGCGC AGCGCCTCGA TGTCGACAAA TACCGGCGCT TCCTCGCCGA ACGCGACGCG
CTGGAACGAC GGATTGCCGC CCTGCGCAAC CTGGCCTTGC AAGCCAGCAA CGATCATGAC
GTCTGGCTGG CGACGGCCGA ATCCCAACAC ATTGATAACC CCTACAGCCT GGCTGCGGCA
CTGGCCTGTT ACGACCGCGA CGAACGCACC TCCGCCCGCG GTCTGGAAAT CTCACTGGCG
TTGCTGATTC ACCCAATGGG CCAGCCGACA CCCGGCACAG AAGATCATGA CCGGCGTTTC
AAACGCCTGG AGCAATGGCT GGACCAGCAC GACAGCCCGC TTTACACCGC CTTGGCGCCG
TTCAACCCGT TCAAGGACAA AGCCGATTCG ATCGGCACCT TGTTCGGCGC CAGCGACAAC
GTGATCGAAG GGCTGGCCGG TCGCTTCCCG GCCATGGCGG ACATCACCGA CCTCACCGCC
CAGTCGGTCA ATGCCGTGGT GCTCAAGCGC CTGCGCGGGC AGACCCGATG GGATGCCAGT
CATGGCCTGC GGCGACAGGT GCAGTTGGCA GCGCGTGAGG CTAATGCCGA GAAAGCCCTG
GGATTGCTGG CGGCGCGCTA TCGAATCACC GAGCAGGCCA TTACGGAAAA CCCCTTTAGC
CAGGAGGTGC AGCGGTATTT GAAGAGCGGC ATGGCGCAGG TTGAAGAGAT GAAAGCGTTG
CGCATCTCGG GTAGCCGCAC AGTGTCCATC GAGCTGACCA CCACTGCGCG TGCGAAACCC
AACTTCCTTG GGTTACTCAC CTCCGGCGGT GGTGGTGGTT TAAACGCGGG GATGCTGTGG
TTCAACATCT TATCGCTCAA GACGGCCTAC AACAGCCTGC AGAAGAGCGA TGCACCGGAA
TACACCCTGG GGTTCGCTTC ATCTGTGTTC GGGGTGATCG GTGCAGCGGC GGCAACGTTG
GTCAGCGTAC GGGCAACGCA AAAGGCCGTC ATGCTGAGAT TAAGTGCCAC AGCGCCGGGC
ATGGCCTTTG GCAATGGGGT TATCAAGTTT TTGAGTAGCA ATCTGTTTGC GCGTTTAGCC
GGATACCCGG CGATTGCGCT GGGTTTTTTC GCGGACGGTA CTAAGGCGCT ACGACAGTAC
GAAAATGGTG ATCTAACTGC AGCCGGTTAC ACTGTGGCGG GTGGATTCAC CATGGCTATT
GGTTCCGCTG TCGTCCTTGA AGCAGGACTT GCAATTGCAG GCGTGACATC GGTTGTGCCC
TTTGCCGGAT GGGCCGCCGC TGCCCTTGTC CTCGTAGGTG TAGCCATCAT CGCAGGAGGC
CTCTACCTAC ACGCCAAGGC ACATGAACGC CTTCACAGCC CAATAGAACT GTGGGCAGCA
CGTAGCATAT TCGGCAATCG CATCAATGAT GGAGAGGCGC ACGCCGACAT CAACTTGGAC
TTTGACAAAA AACTGCCTGC TTTCACCTCA CTGCAAACGG AAATTAAGGC TTGGCACAAT
GAACATTACG GGCCCAAGCT ACTATCCGCC GAGCAGGCCC TATCCCTCGG CATAACTAAA
GCCGACACCC GATGGCATCA GAATAACCAC TGGTCGCCGC CAAATTGGAC AGCTATCACA
CATAACGAAG TAGCCACCCC CCAACCAACC GTAGAGTTCA CAGTGCTGCT GCCTGCATTC
AGGCTAGGCG TAAGTGAATG GTCAGGAAGT TTGAGCTCCG TCCGTGACAA CCACGGAATT
GACGTTTTTC CAATCAGCCC GACCGGCCAC CTCGTAGATG CTGGCTTAGT TCTACATTTC
GAAAACACAC TCGCCAACCA AAATCATTTC TCACTTCATC TAACCTACAA CGCCAATCAA
GGCCTGGACG AAGACAATGA GACCCTGTCA ATTTTTCGTC TGGAGCGCTG A
 
Protein sequence
MTNASVSSAT SGPACSARVP ILPVRYAIVP RTADAPACRY ADAGFNLEQG FPTLQHSAYT 
LRALRPGYVY VFMKGPQGEK LVIHEYVGAG LYKELRYQGL EDYHRRERYL SGQSTGWVWA
DTCQDTAEEV WIGYSPHLWT NAITARITGS AALRKRHMRQ LDMAELVSGN QAPSTQPHVL
PVSALQTWVE DFKPTERRMP LTWSSDPVTE TLPIGNLHAI ARHYPWTQPK VPVVVALADA
EGMALDLSLS VSAYQHQLRD LMPAEQLEHT KPAQPPEQER VPACYRLDAE QLSPQSRDFH
HRNLVAMLLN KTLESLYPAD APSPELAAFR LGTSRRGPAL SPAESHFQAL THEDYSPNGA
RLAQRLDVDK YRRFLAERDA LERRIAALRN LALQASNDHD VWLATAESQH IDNPYSLAAA
LACYDRDERT SARGLEISLA LLIHPMGQPT PGTEDHDRRF KRLEQWLDQH DSPLYTALAP
FNPFKDKADS IGTLFGASDN VIEGLAGRFP AMADITDLTA QSVNAVVLKR LRGQTRWDAS
HGLRRQVQLA AREANAEKAL GLLAARYRIT EQAITENPFS QEVQRYLKSG MAQVEEMKAL
RISGSRTVSI ELTTTARAKP NFLGLLTSGG GGGLNAGMLW FNILSLKTAY NSLQKSDAPE
YTLGFASSVF GVIGAAAATL VSVRATQKAV MLRLSATAPG MAFGNGVIKF LSSNLFARLA
GYPAIALGFF ADGTKALRQY ENGDLTAAGY TVAGGFTMAI GSAVVLEAGL AIAGVTSVVP
FAGWAAAALV LVGVAIIAGG LYLHAKAHER LHSPIELWAA RSIFGNRIND GEAHADINLD
FDKKLPAFTS LQTEIKAWHN EHYGPKLLSA EQALSLGITK ADTRWHQNNH WSPPNWTAIT
HNEVATPQPT VEFTVLLPAF RLGVSEWSGS LSSVRDNHGI DVFPISPTGH LVDAGLVLHF
ENTLANQNHF SLHLTYNANQ GLDEDNETLS IFRLER