Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_3610 |
Symbol | |
ID | 1042699 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 4101748 |
End bp | 4102512 |
Gene Length | 765 bp |
Protein Length | 254 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637147024 |
Product | hypothetical protein |
Protein accession | NP_745746 |
Protein GI | 26990321 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4335] DNA alkylation repair enzyme |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.769514 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGACG AACGAAAGTC CCTGATCGAC CGTGGCCACC TGCCAACCCG CAACCTGGCC GAATGCCTGG CGGTGGACCA AGCCGCCTTG GTCAACGCCT TGACAGGGCA ACTGCCAGCA GCATTGGTAG AGCACCTCGC TGCCAGTGCG GAGCAGGCCC AGGCACTGGG CCTGTCAAAA AAAGTGGCGG CCATTGGCCT GGCACTGGGC AAGTGGCTGG AGCAAGCCGC CGAGTCGTTG CGCCAGCAAG TGTTCGAGCA ATGCTGCACG CACCCATCCG ATACCGTGCG CAGCTGGGCG GCATTCGCCC AGGCGTTCCT GTCACGCTCG CAGCCAGCGG AAGATGCCCT GCTGGCGCAG TTTCGCTTCG CCCGCGATGA GCACTTCGGC GTACGTGAAT GGGCCTGGAT CGCCCTGCGC CCGCGCCTGG CCCAGCACCT TGAAACCGCC CTGGCGCTAC TCGGCCGCCA TACCGGTGAT GCCGACCCGC TGGTACGTCG GTTCTGCATC GAGATCCTGC GCCCGCGTGG CGTTTGGTGC GAGCACATTG CCACGCTCAA GCAACAACCA GAAGTGGCCG AGCCGTTGCT GGTACCGCTG CTGGCCGAAG CTGAGAAATA CGCCCAGGAC TCAGTCGCCA ATTGGCTCAA CGATGCCAGC AAGACCCGCC CCGACTGGGT ACTTCAGCTG TTTCAGCGCC ATCCCCCGGC CTGCAAGGCC TCACAGCGCA TCCAGACCCG GGCTACCCGA AGCCTGCGGC AGTGA
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Protein sequence | MSDERKSLID RGHLPTRNLA ECLAVDQAAL VNALTGQLPA ALVEHLAASA EQAQALGLSK KVAAIGLALG KWLEQAAESL RQQVFEQCCT HPSDTVRSWA AFAQAFLSRS QPAEDALLAQ FRFARDEHFG VREWAWIALR PRLAQHLETA LALLGRHTGD ADPLVRRFCI EILRPRGVWC EHIATLKQQP EVAEPLLVPL LAEAEKYAQD SVANWLNDAS KTRPDWVLQL FQRHPPACKA SQRIQTRATR SLRQ
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