Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_3603 |
Symbol | |
ID | 1046383 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 4094715 |
End bp | 4095479 |
Gene Length | 765 bp |
Protein Length | 254 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637147017 |
Product | GntR family transcriptional regulator |
Protein accession | NP_745739 |
Protein GI | 26990314 |
COG category | [K] Transcription |
COG ID | [COG2186] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.180217 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAAATACA GGGCAATGAC AGAGCAGCAG GTACAGGCAA GGACCCGGCG CAAGCCGCGC AGTCTGGCCC AGGAACTGGT CACGGTGCTG ACCGAACGCA TTCGCAGCGG CCAGCTCAAG CGCGGCGACA AGCTGCCGAC CGAATCGCAG ATCATGGCCG AAGAGGGCGT CAGTCGCACG GTGGTGCGTG AGGCGATCTC GCGGTTGCAG GCCGCCGGGC AGGTAGAGAC TCGCCACGGC ATCGGTACAT TCGTGCTGGA TGCACCGGCT ACGGGCGGTT TCCGTATCGA CCCGGCCACC GTGGTCACCC TGCGCGAAGT GCTGGCGGTG CTGGAGTTGC GCATTGCCCT GGAGATCGAG TCGGCCGGGC TGGCAGCCCA GCGGCGAAGC GACGAAGCCC TGGCCGGTAT GCGGGCGGCG CTGGACGAAC TCAACGAGGG GGCGGCCCAC GCCACTGATG CGGTGTCGGC GGACTTCCAG TTCCACCTGC GCATTGCCCA GGCCAGCGGC AACCACTACT TCGCCGACAT CATCAACCAC CTGGGTACCA GCATCATCCC GCGCACCCGG CTGAATTCGG CGCGCCTGGC CCATGATGAC CAGGCGCATT ACATGAGCCG TCTGATGCAT GAGCACGAGG CGATCTATGA GGCGATTGCC CGGCGTGACA GCGAAGGGGC GAAGATGGCC ATGCGCATGC ACCTGAGCAA CAGCCGCGAG CGCTTGCGCC AGGCGCATGA GGCGGCTGAA GCGCAAGGAA CCTGA
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Protein sequence | MKYRAMTEQQ VQARTRRKPR SLAQELVTVL TERIRSGQLK RGDKLPTESQ IMAEEGVSRT VVREAISRLQ AAGQVETRHG IGTFVLDAPA TGGFRIDPAT VVTLREVLAV LELRIALEIE SAGLAAQRRS DEALAGMRAA LDELNEGAAH ATDAVSADFQ FHLRIAQASG NHYFADIINH LGTSIIPRTR LNSARLAHDD QAHYMSRLMH EHEAIYEAIA RRDSEGAKMA MRMHLSNSRE RLRQAHEAAE AQGT
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