Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_3599 |
Symbol | |
ID | 1046377 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 4088930 |
End bp | 4089841 |
Gene Length | 912 bp |
Protein Length | 303 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637147013 |
Product | 5-dehydro-4-deoxyglucarate dehydratase |
Protein accession | NP_745735 |
Protein GI | 26990310 |
COG category | [E] Amino acid transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase |
TIGRFAM ID | [TIGR03249] 5-dehydro-4-deoxyglucarate dehydratase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.815897 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAATCCAC AAGAACTCAA ATCCATCCTC TCCCACGGCC TGCTGTCTTT CCCGGTCACC GACTTCAATG CCCAGGGCGA CTTCAACCCG GCTGGCTACA TCAAGCGCCT TGAGTGGCTG GCCCCCTACG GCGCCAGCGC GCTGTTCGCC GCTGGCGGTA CAGGTGAATT CTTCTCCCTG GCCGCCAGCG AATACAGCCA GGTGATCAAG ACCGCGGTCG ACACCTGCGC CACTTCGGTG CCGATCCTCG CCGGTGTCGG TGGCTCCACC CGTCAGGCCA TCGAATACGC GCAGGAAGCC GAGCGCCTGG GTGCCAAGGG CCTGCTGCTG CTGCCGCACT ACCTGACCGA AGCCAGCCAG GACGGCGTCG CCGCCCACGT CGAAGCGGTG TGCAAATCGG TAAACATCGG TGTGGTGGTG TACAACCGCA ACGTCTGCCG CCTGAACGCC GACCTGCTGG AAAAACTGGC CGAGCGCTGC CCGAACCTGA TCGGCTACAA GGACGGCCTG GGTGATATCG AGCTGATGGT GTCGATCCGT CGTCGCCTGG GCGAGCGCTT CAGCTACCTG GGTGGCCTGC CGACCGCCGA AGTGTATGCC GCCGCCTACA AGGCCCTGGG CGTACCGGTG TACTCCTCCG CTGTGTTCAA CTTCGTGCCG AAAACCGCCA TGGACTTCTA CAACGCCATC GCCCGTGACG ACCACGCCAC CGTGGCCAAG CTGATCGACG ATTTCTTCCT GCCCTACCTG GACATCCGCA ACCGCAAGGC CGGCTACGCC GTGAGCATCG TCAAGGCCGG CGCCAGAATT GCCGGTTACG ACGCCGGCCC GGTGCGTACC CCGCTGACCG ACCTCACCGC CGAAGAGTAC GAAATGCTCG CCGCGCTGAT GGACAAGATG GGCCCGCAGT AA
|
Protein sequence | MNPQELKSIL SHGLLSFPVT DFNAQGDFNP AGYIKRLEWL APYGASALFA AGGTGEFFSL AASEYSQVIK TAVDTCATSV PILAGVGGST RQAIEYAQEA ERLGAKGLLL LPHYLTEASQ DGVAAHVEAV CKSVNIGVVV YNRNVCRLNA DLLEKLAERC PNLIGYKDGL GDIELMVSIR RRLGERFSYL GGLPTAEVYA AAYKALGVPV YSSAVFNFVP KTAMDFYNAI ARDDHATVAK LIDDFFLPYL DIRNRKAGYA VSIVKAGARI AGYDAGPVRT PLTDLTAEEY EMLAALMDKM GPQ
|
| |