Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_3596 |
Symbol | |
ID | 1046370 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 4085298 |
End bp | 4086542 |
Gene Length | 1245 bp |
Protein Length | 414 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637147010 |
Product | FAD dependent oxidoreductase |
Protein accession | NP_745732 |
Protein GI | 26990307 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.953552 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCATTGCC AGACCCTTGT CCTCGGCGCC GGCATCGTCG GCGTCAGCAC CGCGCTGCAC CTGCAGGCAC GCGGGCGCCA GGTAATTCTG ATCGACCGCG ACGAACCGGG CAGTGGCACC AGCCACGGTA ACGCCGGGCT GATCGAGCGC TCCAGTGTCA TCCCCTATGC CTTCCCGCGG CAACTGAGCG CACTGCTGCG CTACGGCCTG AACCGCCAGC CCGATGTGCG CTACAGCCTG GCGCACCTGC CCAAGGCCGC ACCGTGGCTG TGGCGTTACT GGCGCCAGTC GGCACCCGGG CGCCTGGCCG GCGCCGCCGC CGATATGTTG CCGCTGGTGC AGCGCTGTGT CGACGAGCAT GACGCGCTGA TCGCTGCCGC CGGCCTGGAA GGCCTGGTGC AAGCCAAAGG CTGGATCGAA GTGTTCCGCG ACCCCGCGCT GTTCGAGCAG GCAAAAACCG ATGCCAAGGG CCTGAGCCGC TACGGCTTGC GCTTCGAAAT CCTTGAATGC GGGCAGTTGC AGGCACGTGA ACATCAGCTG GACGCCACCG TGGTCGGTGG CATCCACTGG CTCGACCCGA AAACCGTGAA CAACCCCGGC GCGCTCACCC GTGGCTATGC GGCGTTGTTC CTGCAACGCG GCGGGCAGTT CGTGCATGGC GATGCGCGCA GCCTGCGCCA GGCCAATGGC CAATGGCGGG TAGAGAGCCG TCGCGGCCCG ATCACTGCCG ACGAGGTGGT GGCCTGCCTT GGGCCACAGT CAGCCGACCT GTTCAGCGGC CTGGGCTACC AGATCCCGCT GGCAATCAAG CGGGGCTACC ACATGCACTA CAGCACCCGT GACGGCGCTC AGCTGGAGCA CTCGATCTGC GACACCCAAG GCGGCTATGT ACTGGCGCCG ATGGCGCGCG GTGTGCGCCT GACCACCGGC ATCGAATTCG ACGCAGCCAG TGCGCCTGGC AACCAGATCC AGTTGGGCCG CTGCGAGGCC TTGGCGCGCA AGCTGTTCCC GGCCCTCGGC GATCGTCTGG ACGACACGCC ATGGCTGGGC CGCCGCCCCT GCCTGCCGGA CATGCGCCCG GTGATCGGGC CGGCGCCGCG CCACCCAGGG CTGTGGTTCA ACTTCGGCCA TGCCCATCAC GGCCTCACGC TGGGCCCGGT CTGCGGCCGG CTGCTGGCCG AGCTGCTCAC TGGCGAGCCC CCCTTCACCG ACCCCGCGCC TTACAGCGCG ACCCGTTTCG ACTGA
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Protein sequence | MHCQTLVLGA GIVGVSTALH LQARGRQVIL IDRDEPGSGT SHGNAGLIER SSVIPYAFPR QLSALLRYGL NRQPDVRYSL AHLPKAAPWL WRYWRQSAPG RLAGAAADML PLVQRCVDEH DALIAAAGLE GLVQAKGWIE VFRDPALFEQ AKTDAKGLSR YGLRFEILEC GQLQAREHQL DATVVGGIHW LDPKTVNNPG ALTRGYAALF LQRGGQFVHG DARSLRQANG QWRVESRRGP ITADEVVACL GPQSADLFSG LGYQIPLAIK RGYHMHYSTR DGAQLEHSIC DTQGGYVLAP MARGVRLTTG IEFDAASAPG NQIQLGRCEA LARKLFPALG DRLDDTPWLG RRPCLPDMRP VIGPAPRHPG LWFNFGHAHH GLTLGPVCGR LLAELLTGEP PFTDPAPYSA TRFD
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