Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_3595 |
Symbol | |
ID | 1046371 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 4084571 |
End bp | 4085281 |
Gene Length | 711 bp |
Protein Length | 236 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637147009 |
Product | polar amino acid ABC transporter inner membrane subunit |
Protein accession | NP_745731 |
Protein GI | 26990306 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG4160] ABC-type arginine/histidine transport system, permease component |
TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCTTCG ATCAACTGCT GGCAATGGTG CTCGACCCCG ACCTGCTGGA GCGCTATGGC CCGCGCTTCA TCGACGGCCT GCTGGTAACT GCCAAGCTGG TGGCGATTTC CTTCAGCCTG GGTGCTGTGC TCGGTCTTCT GCTGGCCCTT GCACGCCTGT CTCGCAGCCT GGTGCTGCAG CGCATGGCTG CCGGCTACGT GTACTTCTTC CGCGGTTCGC CGCTGCTGGC GCAATTGTTC CTGCTGTATT ACGGCCTGGG CTCGCTCAAA GGTTTCTGGC AGGACGTCGG CCTGTGGTGG TTCTTCCGGG ATGCGTGGTT TTGCACCTTG CTGGCGTTCA CCCTGAACAC TGCCGCCTAT CAGGCCGAGA TCTTCCGCGG CAGCCTGATG GCGGTTGCGC CTGGCCAGCA TGAAGCGGCG CGGGCGCTGA ACCTGAAGCG CTCGACCACC TTCTTCAAGG TGATATTGCC GCAGTCGCTG CTGGTGGCCA TTGGCCCGTT GGGCAACGAA CTGATCCTGA TGATCAAGGC CAGCGCGATC GCCTCGCTGG TGACGATCTA CGACCTGATG GGCGTGACCA AACTGGCCTT CTCGCGCAGT TTCGACTTCC AGATCTACCT GTGGGCCGCT GTGCTCTACC TGGTGATCGT CGAACTGGTG CGGCGCCTGC TGAAACACCT GGAGGCCCGC CTGGGCCGCC ACCTGAACTG A
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Protein sequence | MSFDQLLAMV LDPDLLERYG PRFIDGLLVT AKLVAISFSL GAVLGLLLAL ARLSRSLVLQ RMAAGYVYFF RGSPLLAQLF LLYYGLGSLK GFWQDVGLWW FFRDAWFCTL LAFTLNTAAY QAEIFRGSLM AVAPGQHEAA RALNLKRSTT FFKVILPQSL LVAIGPLGNE LILMIKASAI ASLVTIYDLM GVTKLAFSRS FDFQIYLWAA VLYLVIVELV RRLLKHLEAR LGRHLN
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