Gene PP_3595 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_3595 
Symbol 
ID1046371 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp4084571 
End bp4085281 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content62% 
IMG OID637147009 
Productpolar amino acid ABC transporter inner membrane subunit 
Protein accessionNP_745731 
Protein GI26990306 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4160] ABC-type arginine/histidine transport system, permease component 
TIGRFAM ID[TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCTTCG ATCAACTGCT GGCAATGGTG CTCGACCCCG ACCTGCTGGA GCGCTATGGC 
CCGCGCTTCA TCGACGGCCT GCTGGTAACT GCCAAGCTGG TGGCGATTTC CTTCAGCCTG
GGTGCTGTGC TCGGTCTTCT GCTGGCCCTT GCACGCCTGT CTCGCAGCCT GGTGCTGCAG
CGCATGGCTG CCGGCTACGT GTACTTCTTC CGCGGTTCGC CGCTGCTGGC GCAATTGTTC
CTGCTGTATT ACGGCCTGGG CTCGCTCAAA GGTTTCTGGC AGGACGTCGG CCTGTGGTGG
TTCTTCCGGG ATGCGTGGTT TTGCACCTTG CTGGCGTTCA CCCTGAACAC TGCCGCCTAT
CAGGCCGAGA TCTTCCGCGG CAGCCTGATG GCGGTTGCGC CTGGCCAGCA TGAAGCGGCG
CGGGCGCTGA ACCTGAAGCG CTCGACCACC TTCTTCAAGG TGATATTGCC GCAGTCGCTG
CTGGTGGCCA TTGGCCCGTT GGGCAACGAA CTGATCCTGA TGATCAAGGC CAGCGCGATC
GCCTCGCTGG TGACGATCTA CGACCTGATG GGCGTGACCA AACTGGCCTT CTCGCGCAGT
TTCGACTTCC AGATCTACCT GTGGGCCGCT GTGCTCTACC TGGTGATCGT CGAACTGGTG
CGGCGCCTGC TGAAACACCT GGAGGCCCGC CTGGGCCGCC ACCTGAACTG A
 
Protein sequence
MSFDQLLAMV LDPDLLERYG PRFIDGLLVT AKLVAISFSL GAVLGLLLAL ARLSRSLVLQ 
RMAAGYVYFF RGSPLLAQLF LLYYGLGSLK GFWQDVGLWW FFRDAWFCTL LAFTLNTAAY
QAEIFRGSLM AVAPGQHEAA RALNLKRSTT FFKVILPQSL LVAIGPLGNE LILMIKASAI
ASLVTIYDLM GVTKLAFSRS FDFQIYLWAA VLYLVIVELV RRLLKHLEAR LGRHLN