| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_3592 |
|---|
| Symbol | |
|---|
| ID | 1046364 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida KT2440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002947 |
|---|
| Strand | + |
|---|
| Start bp | 4082052 |
|---|
| End bp | 4082975 |
|---|
| Gene Length | 924 bp |
|---|
| Protein Length | 307 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637147006 |
|---|
| Product | RpiR family transcriptional regulator |
|---|
| Protein accession | NP_745728 |
|---|
| Protein GI | 26990303 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1737] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAGAAA ACATTCATTT TCTTCCCAAG CCTCACCCCT GGAGCCGCAG CATGAGCCAA
CTGATCAAGC AACGCCTGGA AAACAGCCTC GAAGGGGCCG CTGCCTCGGG TCGCAAGATC
GCCACCTACA TGCTTGCCAA CCTGCACGAA CTGCCGTTCC AGACCTCGGC CAGCATTGCC
GCCAAGCTGG GCGTCAGCGA ATCCAGCGTC GGGCGCTACT GTCGCTCACT GGGTTATGCC
CACCTCAAGG CGCTTAAGCA AGACCTGCAG AACGATCTGG GCGATGGCCC GTGGCTGGTG
GGTGATCGCT TGCAAGATTA CCGCCAGAAC CAGGACGCCA GCGACAACGC CGGCAGCCTG
GAGCTGGAAA TCGCCGCCCT GGTGCGCGTA CACGAATACC GCCAGAGCCC CGCCTGGCAC
AACGTGGCGC AACGCCTGGC GAGCAAGCCG CGGGTGTTCA TCGCCGGCTT CCAGACCGAG
CGCGGCATCG CCATGTGCAT GAGCCACCTG CTGCAATACC TGCGCGATGG CGTGCAACTG
GTCGACATCA GCGCCGGGCA CTTCGGCGAA GTGCTGCTGG GCCGTGCCGA AGACAGCGCC
CTGGTGGTGT TCGAGGCGCG CCGTTATTCC CGCCATGCCC TGATGCTGTG CCAGAAGGCG
CGCGAGGCTG GCATTGCGGT CACCCTGGTG ACCGACACCT TCTGTGACTG GGCGGATGCC
AATGCCGACG AGGTGTTCCG CATCCCCACC GAGTTCAACC TGTTCTGGGA ATCCACCTCG
ACGATGCTGT CGTGGGTGCA TCTGATGGTC AACGAGGTCT GCAAGAAGCT CGGACCGGAT
GTTGAAAAAC GCTTGGAAGC AACTGCCGCT CTACATAACG AATTCGTCGG CTACACCTCG
TGGTCGACGG GCAAACAACA ATAG
|
|---|
| Protein sequence | MTENIHFLPK PHPWSRSMSQ LIKQRLENSL EGAAASGRKI ATYMLANLHE LPFQTSASIA
AKLGVSESSV GRYCRSLGYA HLKALKQDLQ NDLGDGPWLV GDRLQDYRQN QDASDNAGSL
ELEIAALVRV HEYRQSPAWH NVAQRLASKP RVFIAGFQTE RGIAMCMSHL LQYLRDGVQL
VDISAGHFGE VLLGRAEDSA LVVFEARRYS RHALMLCQKA REAGIAVTLV TDTFCDWADA
NADEVFRIPT EFNLFWESTS TMLSWVHLMV NEVCKKLGPD VEKRLEATAA LHNEFVGYTS
WSTGKQQ
|
|---|
| |