| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_3583 |
|---|
| Symbol | |
|---|
| ID | 1046361 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida KT2440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002947 |
|---|
| Strand | - |
|---|
| Start bp | 4065953 |
|---|
| End bp | 4069060 |
|---|
| Gene Length | 3108 bp |
|---|
| Protein Length | 1035 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637146998 |
|---|
| Product | acriflavin resistance protein |
|---|
| Protein accession | NP_745720 |
|---|
| Protein GI | 26990295 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG0841] Cation/multidrug efflux pump |
|---|
| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.268046 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACCTGT CCGGGCCTTT CATTCGTCGC CCGGTGGCGA CCATGCTGTT GAGCCTGGCG
ATCATGCTGC TGGGCGGGGT CAGCTTTGGC TTGCTGCCGG TGGCGCCTCT GCCGCAAATG
GACTTCCCGG TGATCGTGGT GTCGGCGAAC CTGTCTGGTG CCAGCCCCGA GGTCATGGCG
TCCACCGTGG CCACACCGCT GGAGCGCAAG CTGGGCAGCA TCGCCGGCGT CACCACGCTC
ACCAGCAGCT CCAACCAGGG TTCGACACGG GTAGTCATCG GCTTCGAGTT GGGCCGTGAC
ATCGATGGCG CAGCCCGTGA GGTTCAAGCG GCGATCAACG CTACCCGCAA CCTGCTGCCC
AGTGGCATGC GCAGCATGCC CACCTACAAG AAGATCAACC CGTCGCAGGC GCCGATCATG
GTGCTGTCGC TGACTTCGGA TGTGTTGCAG AAAGGCCAGC TGTATGACCT GGCCGACACC
ATCCTTTCAC AGAGCCTGGC TCAGGTGTCG GGGGTAGGGG AGGTGCAGAT CGGTGGCAGT
TCGCTGCCGG CCGTGCGCAT TGCCGTCGAG CCGCAACTGC TCAACCAGTA CAACCTGTCG
CTGGACGAAG TGCGCACCGC AGTATCCAAC GCCAACCAGC GCCGGCCCAT GGGCTTTGTC
GAAGACGCCG AGCGCAACTG GCAGGTGCGG GCCAACGACC AGTTGGAAAG CGCCAAGGAT
TACGAGCCGG TGGTGATTCG CCAACAGAAC GGCACCATTC TGCGCCTGTC TGACGTGGCG
ACCGTCACCG ACGGCGTTGA AAACCGTTAC AACAGCGGCT TCTTCAACGA CCAGGCAGCG
GTGCTGCTGG TGGTCAACCG CCAGACCGGC GCCAACATCA TCGAAACGGT CGACCAGATC
AAGGCGCAGC TACCGGCACT GCAGTCGTTG CTGCCTGCCA GCGTGCAACT GAACGTGGCC
ATGGACCGCT CGCCCGTGAT CAAGGCCACC CTCAAAGAGG CCGAGCACAC CCTGCTGATC
GCCGTGGTGC TGGTGATCCT GGTGGTCTAC CTGTTCCTCG GCAGCCTGCG CGCCTCGCTG
ATCCCCAGCC TGGCGGTGCC GGTATCGCTG GTGGGCACGT TCGCAGTCAT GTACGTGTGC
GGTTTCTCGC TCAACAACCT GTCGCTGATG GCGCTGATCC TTGCCACCGG GCTGGTGGTG
GACGATGCCA TCGTGGTGCT GGAAAACATC TCCAGGCATA TCGAGAACGG CCAGCCACCG
ATGAAGGCGG CCTTCCTGGG CGCCAAGGAG GTGGGTTTCA CCTTGCTGTC GATGAACGTG
TCGCTGGTGG CGGTGTTCGT CTCCATCCTG TTCATGGGCG GCATCGTGCG CAACCTGTTC
CAGGAGTTTT CCATCACCCT GGCGGCGGCG ATCATCGTCT CGCTGGTGGT GTCGCTCACC
CTTACACCGA TGCTCTGCGC CCGCTGGCTC AAGCCGCAAC AGGCCGAGCA GACACGCCTG
CAGCGCTGGA GCGACACGCT GCATCAGCGC ATGGTTGCTG CCTATGACCA CAGCCTGGGC
TGGGCCCTGC GCCACAAGCG GCTGACCCTG CTCAGCCTGC TGGCCACCAT CGGCATCAAC
ATCGCCCTGT ACGTGGTGGT GCCCAAGACG CTGATGCCCC AGCAGGATAC CGGCCAGTTG
ATGGGCTTCA TCCGGGGTGA CGACGGCCTG TCGTTCACGG TGATGCAGCC GAAGATGGAA
ATCTACCGCC GCGCCTTGCT GGCCGACCCG GCAGTACAGA GCGTCGCCGG TTTCATCGGT
GGCAACAGCG GTACCAACAA CGCCTTTGTG CTGGTGCGCC TGAAACCGAT CAGCGAGCGC
AAGATCGACG CGCAGAAGGT GATCGAGCGC CTGCGCAAGG AACTGCCCAA AGTGCCCGGC
GGGCGCCTGT TCCTGATGGC CGACCAGGAC CTGCAACTGG GGGGCGGTGG GCGTGACCAG
ACCTCTTCTC AGTACCTGTA TACCCTGCAA AGCGGCGACC TGGCGGCGTT GCGCGAATGG
TTTCCCAAGG TGGTCGCGGC GCTGCGTGCA CTGCCTGAGC TGACCGCCAT CGACGCCCGC
GATGGTGCCG GTACCCAACA GGTGACGCTG GTGGTCGACC GTGACCAGGC CAAGCGCCTG
GGCATCGACA TGGACATGGT CACCGCAGTA CTGAACAACG CCTACAGCCA GCGGCAGATC
TCCACCATCT ATGACAGCCT CAACCAGTAC CAGGTGGTGC TCGAGATCAA CCCGAAATAC
GCCTGGGACC CGAGCACGCT GGAGCAAGTG CAGGTGATCA CCGCCGACGG CGCCCGGGTG
CCGCTGTCGA CCATCGCCCA CTACGAGAAC AGCCTGGCCA ACGACCGGGT CAGCCACGAA
GGCCAGTTCG CCTCGGAAGA CATCGCCTTC GACGTCGCCG AGGGCTACAG CCCCGACCAG
GCCATGGCGG CACTGGAGCG CGCGGTGGCC AAACTGGGCC TGCCCGAGGA GGTGATTGCC
AAGCTCGGCG GCACTGCCGA TGCCTTTGCC CAGACCCAGC AGGGCCAGCC CTTCATGATT
CTTGGCGCAC TGCTGCTGGT GTACCTGGTG CTGGGCATTC TGTATGAAAG CTACATTCAC
CCGCTGACCA TTCTATCGAC ACTGCCTTCG GCGGGCGTCG GTGCCTTGCT GGCGCTGTAC
GTCACCGGTG GCGAGTTCAG CCTGATCTCG TTGCTGGGGC TGTTCCTGTT GATCGGGGTG
GTGAAAAAGA ATGCCATCCT GATGATCGAC CTGGCCTTGC AGCTGGAGCG CCATCAGGGC
TTTTCGCCGG AAGAGTCGAT CCGCCGGGCC TGCCTGCTGC GCCTGCGGCC GATCCTGATG
ACCACCCTGG CGGCAATCCT TGGCGCATTG CCGTTGCTGC TGAGCCAGGC TGAAGGCGCA
GAAATGCGTC AGCCGCTGGG CCTGACCATC ATCGGTGGCC TGGTGTTCAG CCAGATCCTC
ACCCTTTATA CGACGCCGGT GGTTTACCTG TACCTGGACC GCCTGCGCCA CCGTTTCAAC
CGTTGGCGCG GCGTGCGTAC CGACGCCGCT CTGGAAACCC CGCTATGA
|
|---|
| Protein sequence | MNLSGPFIRR PVATMLLSLA IMLLGGVSFG LLPVAPLPQM DFPVIVVSAN LSGASPEVMA
STVATPLERK LGSIAGVTTL TSSSNQGSTR VVIGFELGRD IDGAAREVQA AINATRNLLP
SGMRSMPTYK KINPSQAPIM VLSLTSDVLQ KGQLYDLADT ILSQSLAQVS GVGEVQIGGS
SLPAVRIAVE PQLLNQYNLS LDEVRTAVSN ANQRRPMGFV EDAERNWQVR ANDQLESAKD
YEPVVIRQQN GTILRLSDVA TVTDGVENRY NSGFFNDQAA VLLVVNRQTG ANIIETVDQI
KAQLPALQSL LPASVQLNVA MDRSPVIKAT LKEAEHTLLI AVVLVILVVY LFLGSLRASL
IPSLAVPVSL VGTFAVMYVC GFSLNNLSLM ALILATGLVV DDAIVVLENI SRHIENGQPP
MKAAFLGAKE VGFTLLSMNV SLVAVFVSIL FMGGIVRNLF QEFSITLAAA IIVSLVVSLT
LTPMLCARWL KPQQAEQTRL QRWSDTLHQR MVAAYDHSLG WALRHKRLTL LSLLATIGIN
IALYVVVPKT LMPQQDTGQL MGFIRGDDGL SFTVMQPKME IYRRALLADP AVQSVAGFIG
GNSGTNNAFV LVRLKPISER KIDAQKVIER LRKELPKVPG GRLFLMADQD LQLGGGGRDQ
TSSQYLYTLQ SGDLAALREW FPKVVAALRA LPELTAIDAR DGAGTQQVTL VVDRDQAKRL
GIDMDMVTAV LNNAYSQRQI STIYDSLNQY QVVLEINPKY AWDPSTLEQV QVITADGARV
PLSTIAHYEN SLANDRVSHE GQFASEDIAF DVAEGYSPDQ AMAALERAVA KLGLPEEVIA
KLGGTADAFA QTQQGQPFMI LGALLLVYLV LGILYESYIH PLTILSTLPS AGVGALLALY
VTGGEFSLIS LLGLFLLIGV VKKNAILMID LALQLERHQG FSPEESIRRA CLLRLRPILM
TTLAAILGAL PLLLSQAEGA EMRQPLGLTI IGGLVFSQIL TLYTTPVVYL YLDRLRHRFN
RWRGVRTDAA LETPL
|
|---|
| |