| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_3582 |
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| Symbol | |
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| ID | 1046353 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | - |
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| Start bp | 4064466 |
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| End bp | 4065956 |
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| Gene Length | 1491 bp |
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| Protein Length | 496 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637146997 |
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| Product | RND efflux transporter |
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| Protein accession | NP_745719 |
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| Protein GI | 26990294 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.109729 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTTTTG CCCAGACCCC ACTTCACCGT GCCCTGCAAG CACTGACCCG TGGCCGTGGC
TCGCGCCTGC TCGGTGCCGG GTTGTGCGTG GCCTTGCTCA GTGCCTGTAC CCTGAGCCCC
GACTACCACC GCCCTGAGCT GAACAGCACG GCGGCGCAGT TCAAGCACGC CGAAGGCTGG
ACCCAGGCCT CGCCGTCCGA CGCCATCGCC CGCGGCGCCT GGTGGGAAAT CTACGGCGAT
GCTGGGCTCA ATGCGCTGGT CGAAGAGCTC AACCGCAGCA ACCAGACCGT GGCGCAATCA
GAAGCCCAGT ATCGCCAGGC CCAGGCGCTG GTGCGCAGCA GCCGTGCGGC GCTGTTCCCC
AGCCTGGACC TGAGCACCAG CAAGAACCGC TCGGCGCAGG GCACCGGCAG CTCCAGTTCC
AGCCTGTCCA ATAACAGCAG CGGCATTCGC AACACCTACA ACGCGCAGTT GGGCGTGAGC
TGGGAGATCG ACCTGTGGGG CAAGCTGCGC GAAACCCTGA ATGCCAACGA GGCCAGTGCC
GAAGCCAGTT TCGCCGACCT TGCGTCGATC CGCTTGAGCC AACAGTCGGA ACTGGTGCAG
AACTACCTGC AATTGCGGGT GATCGATGAG CAGAAGCGCT TGCTGGAAGC CACCGTGGCG
GCTTATGAGC GCTCGCTGCG AATGAACGAA AACCAGTACC GCGCCGGTGT CGCCGGCCCG
GATGCCGTGG CCCAGGCCCG TACGCAGCTC AAAAGTACCC AGGCTGACCT GATTGACCTG
ATCTGGCAGC GTGCGCAGTT CGAAAACGCC ATCGCCGTGC TGCTGGGCAA GGCTCCGGCC
GACTTCGCCC TGGCCGACAG CAAGGCGATT CCCGCGTTGC CGCAAATACC GGTTTCGCTG
CCTTCGCAGC TGCTGGAGCG GCGCCCGGAC ATCGCTGCAG CCGAACGCAA CGTGATGGCG
GCCAACGCCA ACATCGGGGT GTCGCGGGCA GCCTATTTCC CGGACCTCAG CCTGAGCATG
AGTGGCGGTT ATTCCAGCAG CAGCTTCAGC AACTGGATCG AGCTGCCCAA CCGCTACTGG
TCGGTAGGCC CGCAGCTGGC GCTGACCCTG TTCGACGCCG GCAAACGCAG CGCCGAGGTC
GACCGCACGG TGGCCGTGTA TGACCAGACG GTGGCGCAGT ACCGCCAGAC CGTGCTGGAC
GGTTTCAGGG AAGTGGAAAA CCTGCTGGTT CAGCTGAAGG TGTATGGCGA TGAAGCCGTG
GTGCGCCAAG AGGCGCTTGA TGCTGCCCGC GAGTCGTTGC GCCTGACCGA GAACCAGTAC
CGCGCCGGGC TGATCGGCTA TCTGGATGTG GTCAACGTGC AAACCACGGC GCTGAGCAAC
GAGCGCAGCG TGCTGAACCT GCTGCAAGGG CGCCTGGTGG CCAGTGTGCA ACTGGTGGCT
GCGTTGGGCG GCGGCTGGGA TGCAGAGCAG GCGTTTGCCG AGCAGAATTG A
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| Protein sequence | MTFAQTPLHR ALQALTRGRG SRLLGAGLCV ALLSACTLSP DYHRPELNST AAQFKHAEGW
TQASPSDAIA RGAWWEIYGD AGLNALVEEL NRSNQTVAQS EAQYRQAQAL VRSSRAALFP
SLDLSTSKNR SAQGTGSSSS SLSNNSSGIR NTYNAQLGVS WEIDLWGKLR ETLNANEASA
EASFADLASI RLSQQSELVQ NYLQLRVIDE QKRLLEATVA AYERSLRMNE NQYRAGVAGP
DAVAQARTQL KSTQADLIDL IWQRAQFENA IAVLLGKAPA DFALADSKAI PALPQIPVSL
PSQLLERRPD IAAAERNVMA ANANIGVSRA AYFPDLSLSM SGGYSSSSFS NWIELPNRYW
SVGPQLALTL FDAGKRSAEV DRTVAVYDQT VAQYRQTVLD GFREVENLLV QLKVYGDEAV
VRQEALDAAR ESLRLTENQY RAGLIGYLDV VNVQTTALSN ERSVLNLLQG RLVASVQLVA
ALGGGWDAEQ AFAEQN
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