Gene PP_3578 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_3578 
Symbol 
ID1046356 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp4059258 
End bp4060895 
Gene Length1638 bp 
Protein Length545 aa 
Translation table11 
GC content65% 
IMG OID637146993 
Productphosphoglucomutase 
Protein accessionNP_745715 
Protein GI26990290 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0033] Phosphoglucomutase 
TIGRFAM ID[TIGR01132] phosphoglucomutase, alpha-D-glucose phosphate-specific 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCTCA GTCCTTTGGC AGGCAAGCCG GCTCCGGCCA GCGTGCTGGT CGATATTCCC 
CGGCTGCTTA CCGCCTATTA CACGGGCCGC CCAGACGCTA CCGTGGCGGC CCAGCGCGTG
GCCTTCGGCA CCTCGGGGCA CCGGGGCAGT TCGCTTGAAT TGAGTTTCAA CGAGTATCAC
GTCCTGGCCA TTAGCCAGGC GATCTGCCTG TACCGCCAGG AAAAAGGCAT CGATGGCCCG
CTGTTCATTG GCGCCGATAC CCACGCCCTG TCAGCGCCGG CGACCGCCAG CGCCCTGGAA
GTGCTGGCCG CCAACGGCGT GCAGGTGATG CTGTCCAAGG ATGACGAATA CACGCCTACG
CCGGCGGTTT CTCACGCCAT CCTCTGCCAC AACCGCGGCC GCACGCAGGG CCTGGCTGAC
GGTATCGTCA TCACCCCGTC GCACAACCCG CCGCAAAGCG GTGGCTTCAA GTACAACCCA
CCCAACGGCG GCCCGGCCGA CAGCGACGTG ACCAAGTGGA TCGAGGGCAA GGCCAACGAG
CTGCTGGCGG CTAATCTGGC GGGCGTCAAG CGCATGGACC ATGCCCAGGC GCTGCAGGCG
CCGACCACCC ACCGCCACGA CTACGTCAGC AACTATGTGG CCGACCTGGA AAACGTCATC
GATTTCGATG TCATCCGTGG CGCTGGGCTG CGCCTGGGCG TCGACCCGCT GGGCGGGGCA
GGGGTACGCT ACTGGTCGGC AATTGCCAAG CACTACCAGC TGGACCTGGA AGTGGTGAAC
ACCGAGGTCG ACCCGACCTT CCGCTTCATG ACCGTCGACT GGGATGGTCA GATCCGCATG
GACCCTTCCT CGCCGTATGC CATGCAGGGC CTGATAGGTC TGCGCGAGCG CTTTGACGTG
GCCTTCGCCT GCGACCCGGA CCACGACCGC CACGGCATCG TCACCCCTGA CGGCCTGCTG
CAACCCAACA ACTACCTCGC CGTGGCCATC GACTACCTGT TCCGCCACCG CCCGCAGTGG
CGCAGTGACG CCGCCGTGGG CAAGACCGTG GTCTCCAGCG GCCTGATCGA CCGCGTTACC
CAACGGCTGG GCCGCGATCT GTATGAGGTG CCGGTGGGCT TCAAGTTCTT CGCCCAGGGC
CTGTTCGACG GTTCGCTCGG TTTTGGTGGC GAAGAAAGTG CAGGGGCTTC GTTCCTGCGT
CGCGATGGCT CGGTGTGGGC CACCGACAAG GACGGGTTGA TCCCGGCCTT GCTGGCCGCC
GAAATGACCG CCCGTACCGG GCGTAACCCG AGCCAGGCTT ATGCCGACCT GACCGAGGCG
CTGGGCAAGC CGTTCGCCAC CCGTGTCGAG GCCAAGGCCG ATGCGCGGCA GAAGGCGTTG
CTGAGCAAGC TGGCGCCGGA GCAGGTGAAG TCGACAGAGC TGGCCGGTGA GCCGATCGTG
CAGATCCTCA GCCACGCCCC AGGCAATGGC CAGGCGATTG GCGGGCTTAA GGTGATGACG
GCCAATGGCT GGTTCGCCGC GCGCCCGTCG GGTACTGAAG ACATCTACAA GATCTACGCC
GAAAGCTTCA TCGACGAGGC GCATTTGCAG CGTCTGGTGG AGGAAGCACA AGTGCTGGTC
GATGAAGCCA TTGCCTGA
 
Protein sequence
MTLSPLAGKP APASVLVDIP RLLTAYYTGR PDATVAAQRV AFGTSGHRGS SLELSFNEYH 
VLAISQAICL YRQEKGIDGP LFIGADTHAL SAPATASALE VLAANGVQVM LSKDDEYTPT
PAVSHAILCH NRGRTQGLAD GIVITPSHNP PQSGGFKYNP PNGGPADSDV TKWIEGKANE
LLAANLAGVK RMDHAQALQA PTTHRHDYVS NYVADLENVI DFDVIRGAGL RLGVDPLGGA
GVRYWSAIAK HYQLDLEVVN TEVDPTFRFM TVDWDGQIRM DPSSPYAMQG LIGLRERFDV
AFACDPDHDR HGIVTPDGLL QPNNYLAVAI DYLFRHRPQW RSDAAVGKTV VSSGLIDRVT
QRLGRDLYEV PVGFKFFAQG LFDGSLGFGG EESAGASFLR RDGSVWATDK DGLIPALLAA
EMTARTGRNP SQAYADLTEA LGKPFATRVE AKADARQKAL LSKLAPEQVK STELAGEPIV
QILSHAPGNG QAIGGLKVMT ANGWFAARPS GTEDIYKIYA ESFIDEAHLQ RLVEEAQVLV
DEAIA