Gene PP_3576 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_3576 
Symbol 
ID1046225 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp4057726 
End bp4058670 
Gene Length945 bp 
Protein Length314 aa 
Translation table11 
GC content67% 
IMG OID637146991 
Productanti-FecI sigma factor, FecR 
Protein accessionNP_745713 
Protein GI26990288 
COG category[P] Inorganic ion transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG3712] Fe2+-dicitrate sensor, membrane component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCCCC ACACCCCAGA AACCCGCGAG GCGCTGCGTG CTGCAGCCCG TTGGCTGGCA 
TTACTGGATT CTGGCGACGC AAGCGAATCT GACCTGCAGC GTCTGGCGCA ATGGCGCGCC
AGCAGTCACC TGCACGAAGA CGCCTGGCAA AAGGCATCAC TGCTGCGAGC GCGATTTGCC
GGGTTGCCCG GCGCATTGGC GATGGCCGCC CTGGATCGTC CGGATGCCGG TCGTCGGGCA
TTGCTCAAAC AAGCCCTGGG TGTGACGGCG TTGTTGCCGG TGGCCTGGCT GGTGAGCCGT
GAGCTGCCGC TGGATGCCTG GACCGCCGAC ATGCGCACCG CAGTCGGGGA GCGCAGGCAG
GCACTGCTGA GCGACGGCAC CTTGTTGCAG TTGAACACCG ACAGTGCGGT CGATATCGAG
CTGGGTGCAG GCCGCGTGGC ACTGCTGCGC GGTGAAGTGG CCGTGAGCGT GCCCGCTAAC
CTGAGCCTCA CCTTGCAGGT GCCTTACGGC CGGGTGGTGC TCAGTGAGGG CGAGGCGTGC
CTGCGCCTGC TTGATGAGGC CTGCCGGGTG TCGGCGATCA AGGGGGCGGT CAGCCTGCAG
CCGTTGCGGG GTCCAGCCGT GATGCTACAG GACGGCCAAC AGGCCAGTTT GCAGGCGGCC
GGCGTTGGCC CTGTCAAAGC GTTCGACGCA TGGCAACTGG GCTGGCGCGA AGGTGCGCTA
CGGCTGGACG ACCGACCGCT GGGCGAGTTG CTGCACGAAC TGCGCAGGTA TCGCCCCGGC
GTACTGCGCT GGGCACCAGA ACTGGAGCGC TTGCGTGTTA CCGGCACGTT CCGCCTTGAC
GACACCGACC GGGTGTTGGC CCTGCTCGCC GCCAGCCTGC CGTTGCAGGT GCAGACCCGC
ACGCGTTATT GGGTGAGCCT GACCGCACGA GAAAATCGAT CATGA
 
Protein sequence
MSPHTPETRE ALRAAARWLA LLDSGDASES DLQRLAQWRA SSHLHEDAWQ KASLLRARFA 
GLPGALAMAA LDRPDAGRRA LLKQALGVTA LLPVAWLVSR ELPLDAWTAD MRTAVGERRQ
ALLSDGTLLQ LNTDSAVDIE LGAGRVALLR GEVAVSVPAN LSLTLQVPYG RVVLSEGEAC
LRLLDEACRV SAIKGAVSLQ PLRGPAVMLQ DGQQASLQAA GVGPVKAFDA WQLGWREGAL
RLDDRPLGEL LHELRRYRPG VLRWAPELER LRVTGTFRLD DTDRVLALLA ASLPLQVQTR
TRYWVSLTAR ENRS