| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_3575 |
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| Symbol | |
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| ID | 1046354 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | - |
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| Start bp | 4055253 |
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| End bp | 4057658 |
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| Gene Length | 2406 bp |
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| Protein Length | 801 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637146990 |
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| Product | TonB-dependent siderophore receptor |
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| Protein accession | NP_745712 |
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| Protein GI | 26990287 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTGCAG TAAAATCTTG CCGCCTGCGC CCACTGGCGC GCGCAGCACA TCCATTGTTC
GCGATGAGCC TGCTGTTGTG TGCACCCGCC TGGGCCGATG AGCCGGCCCG GCGTACGTTC
CAGGTGGCGC CAGCCAGCCT GGGTGCCGCT TTGACCCATT TCGCCGACCA GGCCGGTGTC
AGCCTTTCGC TGGACCCGGC ATTGGTAGAG GGCCGGCAAA GTAACGGCTT GTCCGGTCGT
TACAGTGTCG ATGAAGGCTT CAACCAGTTG CTGCGCAGTA GCGGCCTGCA GGCGCTACCA
GTGGGTGAGG GGGCCTTCAC CCTGATGCCA GCCCCTCAGG CCAGTGGCGC GCTTGAAATC
GCCCCCACCC GCATCGTCGG CGGCCTGGCC GCAGGCAACG AAGCGCAGCC GTATGCCGGT
GGCCAAGTGG CACGCCAAGG GGCACAAGGT TTGCTCGGTT CGCGCGACTT CATGGAAACC
CCGTTCAGCA TCACCAGCTA CACCAGCGAC CTGGTCAAGA ACCAACAGGC GCGCACCTTG
GGCGAGCTGA TTGCCAGTGA CCCTTCAGTG CGTGCTACCA ACCCGGCGGG CGGGCGTTTC
GAGCAGTTCA CCATTCGCGG CTTCAGCCTG TTCAACAGTG ATGTGGCCTA CAACGGTCTC
TATGGCATCT TGCCGACCTA TTCGATCGAC ATGGAAATGG CCGACCGGGT CGACATCATC
AAAGGCCCCA GCCAGTTGAT CAACGGCATT TCACCGCGTG GCAGCGTGGG CGGCGGTATC
AACGTGCAGC CCAAGCGAGC CGCTGACAAG CCGATCACCG AATTCACCGG CAGCTACGCC
TCGGCCGGCC AGGCTGGCGG CGCAGTGGAC ATCGGCCGTC GCTTTGGTGA AGGCCAGCAG
TTCGGCGTGC GCTTCAATGG CGTGAAGCAG GCCGGTGATA CCGAATGGGA CCACCAGCGC
GTCGACCGCG AAATGGCGGT GCTGGGCCTG GATTTTCGAG GCGAGCGCCT GCGTCTCTCG
GCAGACCTTG GCCACACCGA ACGCGACACT GACGCCCCGC AGGAGCGTGT GCTGGTCGGT
GCCAATGCCA AGGTGCCCAA TGCCAATGAC GTACGCCACA ACTACGCCCA GGCCTGGAGC
AAGGCGCGTA CCAACGACAC CTTCGGTGCG CTGAACGCCG AGTACGATAT CAGCGAATCG
CTGCTGGCCT ATGGTGCGGT TGGCGCGCGC AAGAGCAACC ATGACTTCCT GCGCCATAAC
GTGTCGATCA CCAACGATGC CGGCGACTTT ACCGTGCAGC CGCGTGACTT TACCCGGGAC
GAGTCGGTGC GCACCGCCAT GGCTGGTTTA CGTCACTGGT TCCATACCGG GCCGGTGAGC
CACGAGCTGA ACCTGGCCGC CACCTATTAC TACATGGACT TCACCAACGG CGGGGCGCGC
TATGCCTCGG CGCCGAGCAA CCTCTACGAC CCGGTGGCCG CACCGACACC CGGTACGCCA
ACCCGCCTCG ACCCCGAGGT CTACACGGAA AACCGCTTCT CCGGCGTGGC CCTGGCCGAT
ACCCTTGGCT TTTTTGACGA CCGCCTGCTG TTGACTCTGG GTGCGCGCTG GCAACGGGTG
CAGGTGGATG ACTGGAGCGA CGGCATCAAA GGCGATACCG GCTATGACGA AGAAAAGGTC
TCGCCTTCTG GGGGCGTACT GCTCAAGGTC ACCGACCAGC TCTCGTTGTA TGCCAATTAC
ATGGAGGGCC TGAGCCAAGG CAAGATCGCC CCATCGACCT CGATCAACGA AGACCAGATC
TTCCCGCCGT TCACCAGCCG CCAGATCGAG GTGGGGGCCA AGTACGACCT CGGCCAGGTG
GCCTTTACCG CCAGCGCCTT CCGCATTCGC CAGCCGGCCT ACGAGACCAA CCCCACCTCG
CGGGTGTTCG GCCCCAATGG CAAGCGTGAC AACCGCGGCA TCGAGCTGAG TGTGTTCGGT
GAGCCGGTGC AGGGCGTGCG GGTGCTGGGT GGGGTGATGT ATATCGACAG CGAGCTGACC
GACACCGTCG GCGGTGCCTA CGATGGCAAC CGCGCGCCGG CCACGCCCGA ATACAACGTC
AATCTGGGGG CTGAGTGGGA CGTGCCAGGG GTGAACGGCC TGACCTTCAC AGCGCGCGGC
ATTCACTCAA GTTCCCAGTA CCTGGACCAG AACAACAGCA AGCGCATCGA TGGCTGGGAG
CGTTATGACC TGGGCGCACG TTACGCCTTC AAGGTGGACG CCACCGAGGT TACCTTGCGG
GCCAGTGTCG AGAATGTGCT CGATGATCGC TACTGGAGCT CGGCGGGGGC GTCGGATGAC
AGTGAGCCGG GGTTGACCCT TTCCACGCCG CGTACTTACC TGTTATCGGC AACCTTGGGC
TTCTAG
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| Protein sequence | MPAVKSCRLR PLARAAHPLF AMSLLLCAPA WADEPARRTF QVAPASLGAA LTHFADQAGV
SLSLDPALVE GRQSNGLSGR YSVDEGFNQL LRSSGLQALP VGEGAFTLMP APQASGALEI
APTRIVGGLA AGNEAQPYAG GQVARQGAQG LLGSRDFMET PFSITSYTSD LVKNQQARTL
GELIASDPSV RATNPAGGRF EQFTIRGFSL FNSDVAYNGL YGILPTYSID MEMADRVDII
KGPSQLINGI SPRGSVGGGI NVQPKRAADK PITEFTGSYA SAGQAGGAVD IGRRFGEGQQ
FGVRFNGVKQ AGDTEWDHQR VDREMAVLGL DFRGERLRLS ADLGHTERDT DAPQERVLVG
ANAKVPNAND VRHNYAQAWS KARTNDTFGA LNAEYDISES LLAYGAVGAR KSNHDFLRHN
VSITNDAGDF TVQPRDFTRD ESVRTAMAGL RHWFHTGPVS HELNLAATYY YMDFTNGGAR
YASAPSNLYD PVAAPTPGTP TRLDPEVYTE NRFSGVALAD TLGFFDDRLL LTLGARWQRV
QVDDWSDGIK GDTGYDEEKV SPSGGVLLKV TDQLSLYANY MEGLSQGKIA PSTSINEDQI
FPPFTSRQIE VGAKYDLGQV AFTASAFRIR QPAYETNPTS RVFGPNGKRD NRGIELSVFG
EPVQGVRVLG GVMYIDSELT DTVGGAYDGN RAPATPEYNV NLGAEWDVPG VNGLTFTARG
IHSSSQYLDQ NNSKRIDGWE RYDLGARYAF KVDATEVTLR ASVENVLDDR YWSSAGASDD
SEPGLTLSTP RTYLLSATLG F
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