Gene PP_3574 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_3574 
Symbol 
ID1045182 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp4054767 
End bp4055159 
Gene Length393 bp 
Protein Length130 aa 
Translation table11 
GC content61% 
IMG OID637146989 
Productendoribonuclease L-PSP 
Protein accessionNP_745711 
Protein GI26990286 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0251] Putative translation initiation inhibitor, yjgF family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCAACA CAAAGGAAAC CTACCCCAAC CAGACCCTGG ACAACGACTT GTGTCAGGCC 
GTGCGGGCGG GCAATACCAT CTACGTGCGC GGCCAGGTCG GTACCGACTT CGAAGGCAAG
CTGGTGGGCC TGGGTGACCC GCGCGCACAA ACCGAACAGG CGATGAAGAA CGTCAAGCAA
CTGCTTGAAG AAGCCGGCTC GGACCTGTCG CACATCGTCA AGACCACCAC CTACATCACC
GACCCGCGCT TCCGCGAGCC GGTGTACAAG GAGGTGGGCA AGTGGCTCAA GGGCGTGTTC
CCGATTTCCA CCGGGTTGGT GGTGGCCGGG TTGGCCCAGG CCGAGTGGCT GATGGAGATC
GACGTGATCG CCGTGGTTCC CGATCAGCAA TGA
 
Protein sequence
MFNTKETYPN QTLDNDLCQA VRAGNTIYVR GQVGTDFEGK LVGLGDPRAQ TEQAMKNVKQ 
LLEEAGSDLS HIVKTTTYIT DPRFREPVYK EVGKWLKGVF PISTGLVVAG LAQAEWLMEI
DVIAVVPDQQ