Gene PP_3571 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_3571 
Symbol 
ID1046228 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp4051276 
End bp4052451 
Gene Length1176 bp 
Protein Length391 aa 
Translation table11 
GC content64% 
IMG OID637146986 
Productacetylornithine deacetylase 
Protein accessionNP_745708 
Protein GI26990283 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases 
TIGRFAM ID[TIGR01892] acetylornithine deacetylase (ArgE) 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGGTGCC GGGCGATGAG TGAATTTGCC AGTCGCGCGC TGCTGGCCCG GCTGATCGGC 
TTTGCCACGG TGAGCCGCGA CTCCAACCTG GCGCTGATCG GTTTTATCCG TGATTACCTG
GCCGAGCTGG GGGTGGAGTG CGAGCTGTTC CATAACCCGG AGGGCACCAA GGCCAACCTG
TTCGCCACTG TCGGCCCCAG GGATGTTGGT GGTGTGGTGC TGTCTGGGCA TACCGATGTG
GTGCCGGTGG ATGGCCAGGC CTGGACAGTC GAGCCGTTTG CCCTGAGTGA GCGTGACGGC
CGCCTGTATG GCCGCGGCAC GGCCGACATG AAAGGCTTTA TCGCCTCGGT GTTGGCTGCT
GTGCCCGCGT TTCTCGCGCA GCCGTTGCGC ATGCCGGTAC ACCTGGCGTT TTCCTATGAC
GAAGAAGTCG GTTGTTTGGG CGTGCGCTCG ATGCTGGCTG CCCTCCAACA GCGCCCGTGT
AAACCACGGC TGTGCCTGAT CGGTGAACCC ACCGAACTCA AACCGGTACT GGGGCACAAG
GGCAAGCTGG CAATGCGTTG CCAGGTGCAG GGCGCAGCGT GCCATTCGGC GTACGCGCCG
TATGGGGTGA ACGCCATCGA GTATGCGGCG AAACTGATTG GCAAGTTGGG TGAAATCGGC
GAGGCCCTGG CACTGCCGGT TCATCACGAC GAGCGCTTCG ATCCACCGTT CTCCACGGTG
CAGGCCGGCG TGATCAAAGG GGGCAGGGCG CTGAACATCG TGCCGGACGA GTGCGAGTTC
GATTTCGAAG TGCGTGCGCT CCCCGGGTTC GAGGCGCAGG CGGTCGCCGA CCAGTTGCAA
ACCTATGCTG AAGCCGAGTT GCTGCCGCGT ATGCGCAAGG TCAATACCGC CAGCGCCATT
CGCCTGGCGC CGCTGAGTGC CTATCCGGGG CTGGCGACAC CGGAAGACAG CGAGGCTGCG
CGGTTGGTGG CGCTACTCAG CGGTTCGGAT ACGTTCGGCA CGGTAGCGTT TGGTACCGAA
GGTGGCTTGT TCGACCAGGC GGGCATCCCC ACCGTGGTGT GCGGCCCTGG CAGCATGGAC
CAGGGCCACA AGCCGGATGA GTTTGTCAGT GTCGAGCAGT TGCGCGGCTG TGATGCCATG
CTGCTGAGGC TGGTGGACTA CCTCAAACAG GCTTGA
 
Protein sequence
MGCRAMSEFA SRALLARLIG FATVSRDSNL ALIGFIRDYL AELGVECELF HNPEGTKANL 
FATVGPRDVG GVVLSGHTDV VPVDGQAWTV EPFALSERDG RLYGRGTADM KGFIASVLAA
VPAFLAQPLR MPVHLAFSYD EEVGCLGVRS MLAALQQRPC KPRLCLIGEP TELKPVLGHK
GKLAMRCQVQ GAACHSAYAP YGVNAIEYAA KLIGKLGEIG EALALPVHHD ERFDPPFSTV
QAGVIKGGRA LNIVPDECEF DFEVRALPGF EAQAVADQLQ TYAEAELLPR MRKVNTASAI
RLAPLSAYPG LATPEDSEAA RLVALLSGSD TFGTVAFGTE GGLFDQAGIP TVVCGPGSMD
QGHKPDEFVS VEQLRGCDAM LLRLVDYLKQ A