| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_3570 |
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| Symbol | |
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| ID | 1046336 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | + |
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| Start bp | 4050043 |
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| End bp | 4051233 |
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| Gene Length | 1191 bp |
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| Protein Length | 396 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637146985 |
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| Product | carbohydrate-selective porin OprB |
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| Protein accession | NP_745707 |
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| Protein GI | 26990282 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3659] Carbohydrate-selective porin |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.481926 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCGCA GCACCCTGAC CGGTGACTGG GGCGGCCTGC GCCATCAACT CGAAGAAGAC
GGCGTCAAGA TCACCGGCGA CTACAGCGGT GAAACCGCCT ACAACGCCCA CGGTGGCCTG
CACCGTTCGG CGCGCTATTC GCAGAACGTC AAGCTGGGCG TGCAGTTCGA CCTGTCGAAA
CTGTACGGCC TGGACAACGG CGGCAAGGTC CAGCTGACCA TCAACGACCG TCGCGGTAAC
AGCGCCTCGG AAGACCTGGT CGGCAACCGC CTGCCAATCC AGGAAAACTA CGGTGGCCTG
TACACCCGCC TGACCGAGCT GAGCTACGAG CGCACACTGT TCACCCCGGC GCTCAACGTC
AAGCTGGGCT ACATGGCCAT GGGCAACGAC CTCGGCGGCC TGGACAGCGG CATCCTGTGC
AATTTCATGA ACGCCGGCTT CTGCGGCCAC CCGCTGAACA TGTCGGGCGG CAGTGGCTGG
ACCAATTACC CCAACGCCCA CCTCGGCGTG CGCGTGAAGT ACGACCTGTC ACCTGCCTGG
CAGTTGCGCG TGGCGGCGTT CAACGTCGAC CCCGAAAGCA ACGGCAACTC CAGCCGCGCC
TGGCACCTGG GGCCCAAGCA CACCACCGGC ACCGTGGTAC CGGTAGAACT GGTATACAAG
CTGCAGGGTG AACTGCCAGG CGAGTACAAG CTTGGTTACT ACTACGACAG CTCTGATGTG
AAACGCATCG GCAGCGATGA TGAAGTGTCC GGCCGAGGTG GCCATTACCT GCTGGTCGAC
CAGGCGGTGT GGAACGACCA GGCCTCCCCA GGCCGAAGCC TGCACGCCTT CGGCCAGTAC
TCGGCGTCGA GCAAGGCCGC TTCGCCGTTC ACCAAGTGGT ATGGCGCCGG CGTGGTGCTG
TACAAGCCGT TCGAAGGCCG CCCGAAGGAT ACCGTGGCAC TGGGTTACGG CCGCGCCGTA
CCCAACCCGC GTAGCCGCGA TGTGCTGGAA GATGCCGCGT TCAACGCGGG CCAGCAGTTC
CCGGACATCG ACAGCGCCGA ACAGTTGATC GAACTGAGCT ACGGCTACCA GGCCACGCCA
TGGCTGAACC TGCGCCCGGA CGTGCAATAC ATCATCGAGC CAGGGGCGTT CTCGGGCAAA
GACATCGACA ACGCACTCGT GGTCGGCCTG CAGGTCAAGG CGACCTTCTG A
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| Protein sequence | MTRSTLTGDW GGLRHQLEED GVKITGDYSG ETAYNAHGGL HRSARYSQNV KLGVQFDLSK
LYGLDNGGKV QLTINDRRGN SASEDLVGNR LPIQENYGGL YTRLTELSYE RTLFTPALNV
KLGYMAMGND LGGLDSGILC NFMNAGFCGH PLNMSGGSGW TNYPNAHLGV RVKYDLSPAW
QLRVAAFNVD PESNGNSSRA WHLGPKHTTG TVVPVELVYK LQGELPGEYK LGYYYDSSDV
KRIGSDDEVS GRGGHYLLVD QAVWNDQASP GRSLHAFGQY SASSKAASPF TKWYGAGVVL
YKPFEGRPKD TVALGYGRAV PNPRSRDVLE DAAFNAGQQF PDIDSAEQLI ELSYGYQATP
WLNLRPDVQY IIEPGAFSGK DIDNALVVGL QVKATF
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