Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_3562 |
Symbol | |
ID | 1045581 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 4041050 |
End bp | 4041703 |
Gene Length | 654 bp |
Protein Length | 217 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637146977 |
Product | hypothetical protein |
Protein accession | NP_745699 |
Protein GI | 26990274 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3773] Cell wall hydrolyses involved in spore germination |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGGCTAGAC TGAAATTCTG CCCACTGCCT GGTAATGTGC CCATGCGCCT TCACTTGATG CTGATCGGCT TGACCTCGGC CCTGCTCGCA GGCCCCCTGT ACGCCGCTGA CCCGGCCAAG GCCGCCGTTG CCGAGGACAA GGCCGCAGTG CTTGAAGAAA AGGTCGTCGA AGATGCGCCG CCCCCCAGGA AGGCAGAGAA ACTGACCCCA GGCGAAACGC AGGCAGTGGA CCCGGCTGGC CAGGCGCCGC TGGATGACAG CATCACCTGT CTGGCACGTA CCATCTACTG GGAAGCCAAG GGCGCCGACG CCAAAGACAT GACCGCGGTG GCCAGTGTGG TGCTCAACCG CCTGGGCCAC GATGGCTTTC CCGATACCAT CTGCGCGGTA GTCAAACAGG GGGTGGAGAC CAAGGCCTGT CAGTTCTCAT GGTGGTGTGA CGGGCGCCCG GACCAGGTGG AGGAACCGCA ACGCTACGAC GTTGCCAAAG AGATCGCACG CAAGGCACTC AACCAGCAGT TGAAAGACCC CACCGGCGGT GCGTTGTACT TTCACGACCG CACGGTGCGC CCCGACTGGG CGAAGGCTTA TCGCAAGACC GCGCAGACCA CCCACTTCCT CTTCTACAAG CCGAACCAGA CGTTGGCCCA TTGA
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Protein sequence | MARLKFCPLP GNVPMRLHLM LIGLTSALLA GPLYAADPAK AAVAEDKAAV LEEKVVEDAP PPRKAEKLTP GETQAVDPAG QAPLDDSITC LARTIYWEAK GADAKDMTAV ASVVLNRLGH DGFPDTICAV VKQGVETKAC QFSWWCDGRP DQVEEPQRYD VAKEIARKAL NQQLKDPTGG ALYFHDRTVR PDWAKAYRKT AQTTHFLFYK PNQTLAH
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