| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_3546 |
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| Symbol | |
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| ID | 1045377 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | + |
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| Start bp | 4019287 |
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| End bp | 4021353 |
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| Gene Length | 2067 bp |
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| Protein Length | 688 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637146961 |
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| Product | PAS/PAC sensor hybrid histidine kinase |
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| Protein accession | NP_745683 |
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| Protein GI | 26990258 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTTCTC GTGATCTGAA CTCACTGCGC CAACAAGTCG AAGACCTCCA GCGACAGAAC
ACACTGCTGG AGCAACGGCT TGCAAGCCTC CAGGCGCACG ACCAGGACTT CTATCGCTCA
CTGTTCGACA CCATGGACGA AGGCTTCTGC ATCATCGAGT TCTTCGATGG CCCCCATGGC
CCCCTGAGTG ACTACGTGCA CGTGCTGGCC AACGCAGCCT ATGCCAAACA CGCCGGCATC
CCCAACGTGG TGGGGCAAAA ACTGCGCGAG ATGGTGCCCG ATGAGGCGGA TGACTGGGTG
GCCCGCTATG GCGCGGTGCT TCGCACCGGC GAACCGCTGC ACTTCGAGCA GGAACTGATT
GCCACGGGCC ACGTGCTGTC GGTGACCACT TTTCGCATAG AACCTGCCGA GAAACGCCAG
GTAGCGGTGC TGTTCAAGGA TGTCACCGAA CGCCGGCGTG CAGAGCAGGC CCTGCAGCGC
CTGAACGAAG AGCTCGAGCA ACGGGTGAAT GCCGCACTGG CGGAGCGCCG CTTGTTTGCC
GAGCTGGTCG ATCATAGTGT GGTCAATGTG CATGTGGTCG ACAAGGACCT GCGCTGGCTG
GCGGTCAATC GCCAGGCCAG GCATGACTTC CACCTGCTAT ACGGGAGGAC ACCCGAAATC
GGCGACTACC TGCCCGGGTT GTTCGAGGAT GGCACCGCCG GCCAGACGCC TATTCTGCCG
ATGTGGCAGC GCGCCCTGGC AGGCGAGCAG TTCATCGAGA TCGGCACCTT CGGCAAGCCC
CCCGCGGTGC GTCATTATGA GTTGCGCTTC AATGCCTTGC GCGACCCCAA AGGCGAGGTA
CAGGGCGCGT TTCTGTTCGC CTATGACATC AGTGAGCGAG TGCAGGAGCA GGAACGCTTG
GCCAAGGCCG AAGCGGCGCT GCGCCAGGCA CAGAAGATGG AGGCCGTAGG CCAGCTCAGT
GGCGGCATTG CCCACGACTT CAACAATTTG CTGGGCGGCA TCCTGGGCGC CCAGGAGTTG
ATGCGGCAAC GCCTGGACCA GTCACGCTTC GACGCCCTGG CGCCCTTGCT GGAGCTGTCC
AGCAGCGCGG CGCAGCGGGC CTCTTCGCTG GTGCACCGGC TGCTGGCGTT CTCCCGCCAG
CAGACCCTGC AACCCTGCTC CACGCAAGTG GCCACCTTGG TGGCCGGCAT GGAAGACCTG
CTGCGCCGCA CCATCGGCCC GGCGATTACC CTGAGCAGCC GCTTTGCCAG CCAGCTGTGG
CCGACCTTCA TCGACCCTCC CCAACTGGAA AGCGCCTTGC TCAACTTATG CATCAACGCG
CGCGATGCCA TGCCTGCCGG TGGTGTGATC GAGATCATCG GCGACAACCT GCTGCTTGAC
GACGAGCAGG CCGTGGCACT GGAACTGCCG GCCAGCGAGT TCGTGCGGCT GAGCATCGTC
GACAACGGTA GCGGCATGTC GGCTGAAGTT GTCGAGCGCG CAGTCGAGCC GTTCTTCACC
ACCAAGCCGA TGGGCCAGGG TACCGGCCTG GGTCTGTCCA TGACCTATGG CTTCGTGCGG
CAGTCGGGTG GGCAATTACG GGTGCTGTCG GTGCCTGGCG AGGGTACCCG CATCGAGCTG
CTGTTACCCC GCCACCACGA GCAAGCCCAG GCGCCAATCA GCAAACCTCC GCGCACGCTC
TTGCAAAGAA GCAGCGAGGC TGCAAAACGC ATTCTGTTGG TTGAAGACCA GACGGCCTTG
CGCCTGGTGA TTGGCGAAGT GTTGGAAGAG CTGGGCTATC GGGTGGACGC CTTCGAGAAC
GGTCCGTCTG CCCTCACCCA CCTGCAAAGC GGCGAACGGC CAGACTTGCT GCTGAGCGAT
GTCGGCCTGC CTGGCGGCCT GAATGGCCGC CAGGTAGCTG AACGTTTCCG TGAGCGCTAC
CCGGACCTCA AGGTGCTGTT GATCACCGGC TACGATGAGA GTGCGGCGTT CAGCGACGGC
CAACCGCTGC AAGGTACGTT GGTGTTGACC AAGCCGTTCG AACTGGAAGC ACTGGCAGAG
CGGGTTCGCG AGCTGCTGGA ACCTTGA
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| Protein sequence | MPSRDLNSLR QQVEDLQRQN TLLEQRLASL QAHDQDFYRS LFDTMDEGFC IIEFFDGPHG
PLSDYVHVLA NAAYAKHAGI PNVVGQKLRE MVPDEADDWV ARYGAVLRTG EPLHFEQELI
ATGHVLSVTT FRIEPAEKRQ VAVLFKDVTE RRRAEQALQR LNEELEQRVN AALAERRLFA
ELVDHSVVNV HVVDKDLRWL AVNRQARHDF HLLYGRTPEI GDYLPGLFED GTAGQTPILP
MWQRALAGEQ FIEIGTFGKP PAVRHYELRF NALRDPKGEV QGAFLFAYDI SERVQEQERL
AKAEAALRQA QKMEAVGQLS GGIAHDFNNL LGGILGAQEL MRQRLDQSRF DALAPLLELS
SSAAQRASSL VHRLLAFSRQ QTLQPCSTQV ATLVAGMEDL LRRTIGPAIT LSSRFASQLW
PTFIDPPQLE SALLNLCINA RDAMPAGGVI EIIGDNLLLD DEQAVALELP ASEFVRLSIV
DNGSGMSAEV VERAVEPFFT TKPMGQGTGL GLSMTYGFVR QSGGQLRVLS VPGEGTRIEL
LLPRHHEQAQ APISKPPRTL LQRSSEAAKR ILLVEDQTAL RLVIGEVLEE LGYRVDAFEN
GPSALTHLQS GERPDLLLSD VGLPGGLNGR QVAERFRERY PDLKVLLITG YDESAAFSDG
QPLQGTLVLT KPFELEALAE RVRELLEP
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