| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_3543 |
|---|
| Symbol | |
|---|
| ID | 1045563 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida KT2440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002947 |
|---|
| Strand | + |
|---|
| Start bp | 4014642 |
|---|
| End bp | 4016045 |
|---|
| Gene Length | 1404 bp |
|---|
| Protein Length | 467 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637146958 |
|---|
| Product | iron-sulfur cluster-binding protein |
|---|
| Protein accession | NP_745680 |
|---|
| Protein GI | 26990255 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0348] Polyferredoxin |
|---|
| TIGRFAM ID | [TIGR02745] cytochrome c oxidase accessory protein FixG |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.744796 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACGATA GAATCCCTTT TACAGAGATC GCCACCGCCC CAGCCAGCAT CCAAGCACGA
CGCACCGACA GCGGCATCCA TACCCGCAGC TTTACCGGGC TTTACCGTAA CCTGCGCATC
GGCTTTGCCG GCGCCCTGTT CGTGCTGTTC TTCGGCACGG CCTGGCTGAA CTGGAACGGC
CGCCAGGCCG TACTGTGGGA CCTGGGAAAC AGCAAGTTCC ACATCTTCGG CGCCACCTTC
TGGCCCCAGG ACTTCATCCT GCTGTCGGCG CTGCTGATCA TCTGTGCCTT TGGCCTGTTC
GCCATCACCG TCTACGCCGG TCGCGTCTGG TGCGGTTACA GTTGCCCGCA AAGCACCTGG
ACCTGGCTAT TCATGTGGTG CGAAAAGGTT ACCGAGGGGG ACCGCAACCA GCGCATCAAG
CTGGCCGCGG CGCCCTGGAG CCTGAACAAA CTGGCCCGTC GCACGCTCAA ACACAGCCTG
TGGTTGGCCA TTGGCGTGCT CACGGGGCTG ACCTTCGTCG GCTACTTCAC CCCGATCCGG
CCACTGGCCG CAGAATTGCT CACCTTGCAA CTGGGTGGTG TGGCACTGTT CTGGGTGCTG
TTCTTCACGG CCGCGACCTA TATCAATGCC GGCCTGCTGC GTGAGGCGGT GTGCCTGCAC
ATGTGCCCGT ATGCGCGCTT CCAGAGCGTG ATGTTCGACA AGGACACCCT GGCGGTCGCT
TACGACCCGC GTCGTGGCGA GGCCCGTGGT CCGCGCAAGA AAGGCAGTGA CGTCGGTGCC
CAGGGACTGG GCGACTGCAT CGATTGCACC CTGTGCGTGC AGGTGTGCCC CACCGGCATC
GACATCCGTG ATGGCTTGCA GATGGCTTGC ATCGGCTGTG CCGCGTGCAT CGACGCCTGT
GACGGGGTAA TGGACAAGAT GGGTTACGCC CGCGGCCTGA TTGGCTACAA GTCCGAGCAC
AGCCTGCAAG GCGGTACCAC CCACTGGCTG CGCCCGCGCC TGTTGGGCTA CGCTGCCGCA
TTGCTGGTCA TGATCGGGGC ACTGGTGGTG GCACTGCAGA TGCGCCCGAT GGTATCGCTG
GATGTGATCA AGGACCGCGG CCTGTTCCGC GAAAACGCCC AAGGCCAGAT CGAGAACATT
TATCTGCTCA AGGTCATCAA CAAGACCGAA CGTACCCAGC ACTATCAATT GCGCCTGCTG
GACGCTGACG GTTTCACCCT GCAGGGCAGT AGCGCACTGG TCATCCCAGC TGGCGAAATG
AGCGAACTGC CGGTGTCGGT GGCAATGCTC GCCGAGCGCC CGAGCAGCAG CTCGCAGACG
CTGAGCTTTG AAATCAGCGA GCGTGACGAC CCCGCTATCC GCAGCGTGGC GCACAGTCGC
TTCGTCGCCC CCATGAACCG CTGA
|
|---|
| Protein sequence | MNDRIPFTEI ATAPASIQAR RTDSGIHTRS FTGLYRNLRI GFAGALFVLF FGTAWLNWNG
RQAVLWDLGN SKFHIFGATF WPQDFILLSA LLIICAFGLF AITVYAGRVW CGYSCPQSTW
TWLFMWCEKV TEGDRNQRIK LAAAPWSLNK LARRTLKHSL WLAIGVLTGL TFVGYFTPIR
PLAAELLTLQ LGGVALFWVL FFTAATYINA GLLREAVCLH MCPYARFQSV MFDKDTLAVA
YDPRRGEARG PRKKGSDVGA QGLGDCIDCT LCVQVCPTGI DIRDGLQMAC IGCAACIDAC
DGVMDKMGYA RGLIGYKSEH SLQGGTTHWL RPRLLGYAAA LLVMIGALVV ALQMRPMVSL
DVIKDRGLFR ENAQGQIENI YLLKVINKTE RTQHYQLRLL DADGFTLQGS SALVIPAGEM
SELPVSVAML AERPSSSSQT LSFEISERDD PAIRSVAHSR FVAPMNR
|
|---|
| |