| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_3534 |
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| Symbol | |
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| ID | 1046478 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | - |
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| Start bp | 4005156 |
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| End bp | 4006037 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637146949 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | NP_745671 |
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| Protein GI | 26990246 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.154456 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTATCA GCGTGAAATC GAATAGGGCT CTGTTCGACC TCGACCTGCT GCGCGCCATT
GTCGTGGTGG CAGACTGCGG CAGCTTCACC ACCGCTGCCG CGCGGCTGCA TTCGACCCAG
TCGACGATCA GCCAGAAGGT GCGCCGCCTG GAAGACATGG TCGGCCACCG CTTGTTGGTG
CGGGGCAACC GTGACGTACT GCCGACCGAC GCCGGGCAGA CCTTGCTCGG CTATGCCCGG
CACATGCTGG CCCTGAACGA TCAGATGCTT GAAGCCCTGG CCGGGGCGAT GGTGGGCACC
ACGGTACGGC TTGGCGTGCC CGAGGACTTC GTGGGCGGGC GTACCACCAA TGCACTGTCG
GCATTCAGCC GGCTGCACCC ACAGGTGAAG CTCGAAGTGA CCAGTGGTTT GTGCCGTGAC
CTGAGCCAGG CCTATGACAA TGGCGAACTT GACCTGGTGC TGCTCAAGCA GCGGCGCAAC
AGCCGTGAGG GCGTGGCCTG TTGGCCAGAG CGTCTGCAGT GGATCGACAG CGCGCGCACG
CCCGCCTTCG AGCTGGACCC GATCCCGTTG GTCACCTTTC CGCCACGCGG CCTGTACCGC
GAGGACATGA TCAACGCCAT CGAAGGCATG GGCCGGCGCT GGCGCATCAG CTTTACCAGC
TCTAGCCTCA GTGGCATCCA GGCTGCGGTC GCCGATGGCA TGGGTATCAG CTTGCTGCCG
CCCAGGGCGG CCACCGGCGA GCACAGGGTG TTGGGGGCCG GGCAAGGGCT GCCGGAGGTC
GACAGCTATG AGATCGTCAT CGTGCACCGG CCGACGGCGG ATGTGATGGT CAAGGCGCTG
GCTGAGGTGA TGACGCAGTT GCTGGCGGGC GGTGGGATCT GA
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| Protein sequence | MSISVKSNRA LFDLDLLRAI VVVADCGSFT TAAARLHSTQ STISQKVRRL EDMVGHRLLV
RGNRDVLPTD AGQTLLGYAR HMLALNDQML EALAGAMVGT TVRLGVPEDF VGGRTTNALS
AFSRLHPQVK LEVTSGLCRD LSQAYDNGEL DLVLLKQRRN SREGVACWPE RLQWIDSART
PAFELDPIPL VTFPPRGLYR EDMINAIEGM GRRWRISFTS SSLSGIQAAV ADGMGISLLP
PRAATGEHRV LGAGQGLPEV DSYEIVIVHR PTADVMVKAL AEVMTQLLAG GGI
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