Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_3526 |
Symbol | |
ID | 1046310 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 3997312 |
End bp | 3998319 |
Gene Length | 1008 bp |
Protein Length | 335 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637146941 |
Product | AraC family transcriptional regulator |
Protein accession | NP_745663 |
Protein GI | 26990238 |
COG category | [K] Transcription |
COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.382139 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.568026 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCCCACGC CACGCCAGTT CAGCCAAAAG ACCAGCACCA GCAACATGCT ACGGCTCAAA ACAAGCGGCG CCAATGCCCA GGCGCCCTAT CGGGTCGACT TCATCCTGCT CGAACACTTC TCGATGGCCA GTTTCACGGT GGCCATGGAC GTACTGGTCA CGGCCAACCT GCTACGTGCC GACAGCTTCC AGTTCACCCC GCTGTCGCTG GACGGCGACC GGGTGCTCAG CGACCTGGGG CTGGAACTGG TGGCCACCGA GCTGTCCGCT GCGGCGCTGA AGGAGCTGGA CCTGCTGGTG GTCTGCGGCG GCTTGCGCAC ACCACTCAAG TACCCGGAAC TCGATCGCCT GCTAAACGAT TGCGCCGCCC ACGGCATGGC CTTGGGCGGC TTGTGGAACG GCGCCTGGTT CCTTGGCCGT GCCGGGGTGC TGGACGACTA CGGTTGCAGC ATCCACCCCG AGCAACGTGC CAGCCTGTCG GAGCGCAGCC CGCAAACCCG CATCACCCCG GCCAGCTTTA CCCTCGACCG TGACCGCCTC AGCGCCGCCA GCCCCAATGG CGCCATGGAG CTGATGCTGG GCCTGGTACG CCGGCTGTAT GGTGATGGCC TGGCCGAAGG CGTCGAGGAA ATCCTTTCAT TCTCCGGTGC GCGCTACCGC CAGGTGGGTC CTGGGGCGAA GAAGTCCATG AGCCTGCACC TGCGCACCAT TGTCGAGCTG ATGGAGAACA ACCTCGAGGA AACCCTCAGC CTCGACCAGT TGGCCGCCTA CAGCGGGCGC TCGCGGCGGC AGATCGACCG CCTGTTCCAG GCCCAGCTGG GCACGTCGCC CCGGCGCTAT TACATGGAGC TGCGCATCAC CAAGAGCCGC CGGCTGCTGC AGTATTCCGA CCTGTCGGTG ATGGAAGTGG CGGTGGCCTG CGGGTTTGTC TCGGTGTCGC ACTTCAGCAA GTGCTATGCG GCGTATTTCG GCTACCCGCC GTCGCGCGAG CAACGGCTGG GCGAGTGA
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Protein sequence | MPTPRQFSQK TSTSNMLRLK TSGANAQAPY RVDFILLEHF SMASFTVAMD VLVTANLLRA DSFQFTPLSL DGDRVLSDLG LELVATELSA AALKELDLLV VCGGLRTPLK YPELDRLLND CAAHGMALGG LWNGAWFLGR AGVLDDYGCS IHPEQRASLS ERSPQTRITP ASFTLDRDRL SAASPNGAME LMLGLVRRLY GDGLAEGVEE ILSFSGARYR QVGPGAKKSM SLHLRTIVEL MENNLEETLS LDQLAAYSGR SRRQIDRLFQ AQLGTSPRRY YMELRITKSR RLLQYSDLSV MEVAVACGFV SVSHFSKCYA AYFGYPPSRE QRLGE
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