Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_3518 |
Symbol | |
ID | 1046406 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 3991620 |
End bp | 3993065 |
Gene Length | 1446 bp |
Protein Length | 481 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637146933 |
Product | hypothetical protein |
Protein accession | NP_745655 |
Protein GI | 26990230 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.574738 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCATGC CATTGTTTGC TTTCCTGTCG GCACTGCTTT GCCTGAGCGC TGCCCCTGGC CTGGTGCAGG CCGCAGACGT GCCCGCGCCG GATCCGGCGC CTTCCGCTGC CACGCTCGTA GCCAAGGACC CGGTGTTCTC CCAGGAGCAA CTGGACCAGA TGCTGGCCCC CATTGCCTTG TACCCTGATC AGTTGCTGGC TCAGGTGCTG ATGGCGTCAA CCTACCCGGG GCAGGTCAAT GAAGCCGTGA CCTGGTCCAA GGCCAACCCC AAGGCCACCG GCGACGATGC AGTCAGGCAA GTGGCCAAGC AGCCCTGGGA CCCTAGCGTA CAGGCACTGG TGGCCTTCCC GCAGGTGCTG GCAACGCTTG GCCAGGACCC GGTCTGGGTG CAGCGCCTGG GCGATGCTTT CCTCGCCCAG CCCGATGATG TCATGGGCAG CGTGCAGCGT TTGCGCCACC AGGCGCAGGC CGCCGGCAAT CTGCAGAGCA GCCAGTACCA GAATGTAACC GTGCAGACCG CACCTGCACC TGCGCCAGCC GCCAGCGGCA GCAGCACCCA AGGGGCAGCG GCCAGCAGCC CGCCCACCAC CATCGTCATC GAGCCGGCCG ACCCGCAAGT GGTGTATGTG CCCAGCTATA ACCCGACCAC CACCTATGGC ACCTGGGCCT ACCCGGCCTC GCCGCCCATG TACTACCCCG GTTCCGCGCT GGTGGCCGGC CTGGCCTTCG GTACCGGCGT GGCGATTGTC GCCTCGTTGT GGGGCGATTG CGACTGGGAC AACAATGACA TCGACATTGA CGTCAACCGC TACAACAACC TCAACGTCAA CAACCGCATC ACCAACAACC AGAACAAATG GCAGCACAAT TCCGCCAACC GAGACGGTGT GCCATACCGC GACTCTCGCA GCCGTCAGCA GTATGGCCGC CAACTGGACG GTGCCACTCA GCGCACCGCG TTCCGCGGCG ACGACGCCCA ACGGGCCCAG GCCCGAGACA AAGCCAGGGC ATCGATGGAC CGCGCAGGTA TCGAACGGCC GGCTACCAGT AACCGTCAGG CCCGCGAGCA AATGCGCGAG GCCAAGGCAG GCAGTCCCGA CGGCAACCGC ATGCTGTCCC GGGATGATGG CGCGCGGGCT ACTGACCGTC GGCAGGATAC CCGCAATGAC CAAGGCCGCC AGCAGAACGG CAACCTGGCC AATCAACGCC GGCAGGGCGA CGGCCAGGTG CGGCAGCCGG CGCAGAGCCG TCCTGCCAAT ACGGCAGGCC GTGCCCGCAA CAATGCCTTC GACGGTGTGC GCTCGCCGTC GCGCACCAGC GTGCAGGCCA ACCGCGGCCG TACCAGCCAG TCGTTCGCTC AGCGGCCCGG TGCGTCGCGT GCCGCCGGGC ACCCGATCTC CCGGCCCAGT GCGCCCGCGC GTCGCGGCGC AGGAGGCCGT CGATGA
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Protein sequence | MRMPLFAFLS ALLCLSAAPG LVQAADVPAP DPAPSAATLV AKDPVFSQEQ LDQMLAPIAL YPDQLLAQVL MASTYPGQVN EAVTWSKANP KATGDDAVRQ VAKQPWDPSV QALVAFPQVL ATLGQDPVWV QRLGDAFLAQ PDDVMGSVQR LRHQAQAAGN LQSSQYQNVT VQTAPAPAPA ASGSSTQGAA ASSPPTTIVI EPADPQVVYV PSYNPTTTYG TWAYPASPPM YYPGSALVAG LAFGTGVAIV ASLWGDCDWD NNDIDIDVNR YNNLNVNNRI TNNQNKWQHN SANRDGVPYR DSRSRQQYGR QLDGATQRTA FRGDDAQRAQ ARDKARASMD RAGIERPATS NRQAREQMRE AKAGSPDGNR MLSRDDGARA TDRRQDTRND QGRQQNGNLA NQRRQGDGQV RQPAQSRPAN TAGRARNNAF DGVRSPSRTS VQANRGRTSQ SFAQRPGASR AAGHPISRPS APARRGAGGR R
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