Gene PP_3501 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_3501 
Symbol 
ID1043336 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp3970079 
End bp3971614 
Gene Length1536 bp 
Protein Length511 aa 
Translation table11 
GC content59% 
IMG OID637146916 
ProductISPpu14, transposase Orf3 
Protein accessionNP_745638 
Protein GI26990213 
COG category[L] Replication, recombination and repair 
COG ID[COG3436] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTTTCT CGCCCAATCT CGACCAGATG ACCCCGGAAC AGCTTCGTGC CTTGGCGGCA 
CAGGCGTTGC AGTTGCAGTC TCAGGTCGAG GCGATGAGCA AAAAGATCCA GAACGATGAA
ATCCTCATCG AGCAGTTCAA GTTCGAAATC GCCCTGCTCA AACGCCACAA GTTTGCCAAG
CGCAGCGAGC AAATCAGCCC GGCGCAAGGC AGCTTGCTGG ACGACCTGCT CGATACAGAC
CTTGAAGCTA TCGAGGCCGA GCTGAAACAG CTTCTTCCCG CTTCGTCACA GGCCGAGCCA
CGGCAATCGC CCAAACGTGC ACCATTGCCG CCGCAGTTTC CGCGTACCGT GATTCGTCAC
GAACCCGAAA ACACCCAATG CGCCTGTGGC TGCCAACTTC AACGCATCGG CGAAGACGTC
AGCGAGAAGC TGGATTACAC GCCAGGGGTA TTCACGGTCG AGCATCATGT GCGTGGCAAA
TGGGCCTGCC GTCAGTGCGA AACACTGATC CAGGCGCCGG TACCGGCGCA GGTTATCGAC
AAAGGTGTCC CGACCGCAGG CTTGCTGGCC CATGTGATGG TGGCCAAGTT TGCCGATCAC
TTGCCGCTGT ACCGGCAGGA GAAAATCTTT GGCCGCGCCG GGCTGGCGAT TGCTCGCTCG
ACCTTGGCCC AGTGGGTCGG ACAAACCGGT GTGCGACTCC AGCCACTGGT CGATGCACTA
CGTGAAGCGG TGCTGAACCA GGGCGTGATT CACGCTGATG AAACCCCGGT GCAAATGCTT
GCGCCGGGCG AGAAGAAAAC CCACCGGGCC TATGTCTGGG CCTACAGCAC GACGCCGTTT
TCGGCGCTCA ACGCGGTGGT TTATGACTTC AGCCCAAGCC GTGCTGGCGA ACATGCGCGC
AACTTCCTGG GCGACTGGAA CGGTAAGTTG GTCTGCGATG ACTTCGCTGG CTACAAAGCC
GGTTTTGAGC AAGGCATCAC TGAAATCGGC TGCATGGCCC ACGCCCGTCG CAAGTTCTTT
GATCTGCACG TAGCGAATAA AAGCCAGCTG GCTGAACAGG CCCTGCACTC GATCAGCGGT
TTGTACGAGG TCGAACGCCA AGCGCGGGAC ATGAGTGATG AAGATCGTTG GCGAATACGT
CAGGAAATGG CGGTGCCAAT CCTCAAAACA CTGCATGACT GGATGTTGGC CCAGCGCGAC
TTGGTGCCCA ACGGATCAGC CACGGCTAAA GCCCTCGATT ACAGCCTGAA ACGCTGGGTA
GCGCTGACGC GCTACCTGGA CGATGGGGCT GTGCCCATCG ACAACAACCA GGTCGAGAAC
CAGATACGGC CCTGGGCACT CGGGCGCTCG AACTGGCTGT TTGCCGGGTC GCTACGCAGT
GGTAAACGGG CCGCTGCAAT CATGAGCCTG ATCCAGTCGG CGCGTATGAA TGGGCATGAT
CCGTATGCCT ATCTCAAAGA TGTGCTAACT CGGTTGCCAA CACAGCGGGC CAGTGAGATC
GGGCAGCTGC TGCCACATCA GTGGGTGCCT GCCTAA
 
Protein sequence
MTFSPNLDQM TPEQLRALAA QALQLQSQVE AMSKKIQNDE ILIEQFKFEI ALLKRHKFAK 
RSEQISPAQG SLLDDLLDTD LEAIEAELKQ LLPASSQAEP RQSPKRAPLP PQFPRTVIRH
EPENTQCACG CQLQRIGEDV SEKLDYTPGV FTVEHHVRGK WACRQCETLI QAPVPAQVID
KGVPTAGLLA HVMVAKFADH LPLYRQEKIF GRAGLAIARS TLAQWVGQTG VRLQPLVDAL
REAVLNQGVI HADETPVQML APGEKKTHRA YVWAYSTTPF SALNAVVYDF SPSRAGEHAR
NFLGDWNGKL VCDDFAGYKA GFEQGITEIG CMAHARRKFF DLHVANKSQL AEQALHSISG
LYEVERQARD MSDEDRWRIR QEMAVPILKT LHDWMLAQRD LVPNGSATAK ALDYSLKRWV
ALTRYLDDGA VPIDNNQVEN QIRPWALGRS NWLFAGSLRS GKRAAAIMSL IQSARMNGHD
PYAYLKDVLT RLPTQRASEI GQLLPHQWVP A