| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_3488 |
|---|
| Symbol | |
|---|
| ID | 1046481 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida KT2440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002947 |
|---|
| Strand | - |
|---|
| Start bp | 3951890 |
|---|
| End bp | 3952546 |
|---|
| Gene Length | 657 bp |
|---|
| Protein Length | 218 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637146903 |
|---|
| Product | electron transport protein SCO1/SenC |
|---|
| Protein accession | NP_745625 |
|---|
| Protein GI | 26990200 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1999] Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACGCCA AGCCTGCTTG CACACTGTTG GCCCTGAGCC TGGCATTCGC CAGCCACCTG
GCCATGGCCC ACGCCGGTCA CGCGCATGAC GGCCATGCCG GGCAGCCCCC GGCGGCGCAC
CAGGAAAAGA CCAGTGTGCG TTTTGCCGAT GTGTCGCTGC TGAACCAGGA CGGCATGCCG
GTACGCCTGG AGAAAGACCT GGTGGGTGAC CATCTGGTGG TCATGGGCTT CATTTACACC
AGCTGCACCA CGGTATGCCC GGTGGTGTCG TCGATCATGG GCAAGGTCCA GCAGCAGCTG
GGCGGCCGGG TAGGCGAGGA GGTTCGCCTG GTGTCGATCA GTGTCGACCC TCAGCGTGAC
GACGCCAAGC GCCTGCAAAA CTATGCCAAG GCATTCCAGA AAGGGCCGGG CTGGAGCTGG
CTGACCGGTA CCCCGTACGC CATCACCGAA ACCCTGAAGG GGCTGGGCAG CTTCAACGCC
GACCTCAGCC AGCACCCGCC GCTGATACTG GTGGGTGACG GGCGTAGCGG GCACTGGACG
CGTTACTACG GCTTCACCGA CCCGGGCGTA TTGATCGATG AAATCAACCG CCTCAGTGCG
CGCCGGGTAC ATGCCAAGAG CACCGCCATT GCCGACCATC ACGAGGTGCA ACCATGA
|
|---|
| Protein sequence | MNAKPACTLL ALSLAFASHL AMAHAGHAHD GHAGQPPAAH QEKTSVRFAD VSLLNQDGMP
VRLEKDLVGD HLVVMGFIYT SCTTVCPVVS SIMGKVQQQL GGRVGEEVRL VSISVDPQRD
DAKRLQNYAK AFQKGPGWSW LTGTPYAITE TLKGLGSFNA DLSQHPPLIL VGDGRSGHWT
RYYGFTDPGV LIDEINRLSA RRVHAKSTAI ADHHEVQP
|
|---|
| |