Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_3467 |
Symbol | |
ID | 1045526 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 3933499 |
End bp | 3935409 |
Gene Length | 1911 bp |
Protein Length | 636 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637146883 |
Product | GAF modulated sigma54 specific transcriptional regulator, Fis family |
Protein accession | NP_745605 |
Protein GI | 26990180 |
COG category | [K] Transcription [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG3284] Transcriptional activator of acetoin/glycerol metabolism |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGCGAC AACTTATAAC AAACGCCCAC GACCCGCTGC ACGAATCCCG CGAGGCCCGC CTGAAGCTGG CCAGCGAAGG CGAACTACCG CTAGGGATGC TGCGCGACGA GATCGACGCC TCCTGGCGCC GCAGCCTGGG CCACGGCCTG GACTGCCTGC AGGGCGAACA GGTCGGCCTG GGCCTGGAAC AGGGCCATGA CCTGCGCCTG CTGCTGGAGC GCAACCGCCT GCTGATCGAT GCCGTTACCC CCGAACTCGA CTACCTGGTC GCGCGCCAGG GCAAGGCTGG CATCGTCATC CTCGGCGATG CCCAGGCCAA CGTGCTGGCC ATCGAAGGCC AGAAGCACGT GCTGCAACGC GAAGGCCTGC GCGATCTGCA CCCGGGCAGT TGCTGGAGCG AATCGCTGCG CGGCACCAAT GCCATCGGCA CGGCCGTGGT CGAAGGCCGG CCGACGCTGA TCAACTGCGG CGAACATTAC CTCGACCGCC TCAGCCCGTT CTCCTGCACA TCCGTCCCGC TGCGCGACCC GCGCGGCGAG GTGATCGGCG TGCTCGACAT CACCCGCGAA GGGGTGATGG CGCAACCGCA GGACAGCCTG TCGACCCTGA TGCTGGCGGC GGGCAACATT GAAAGCCGCC TGTTTGGCCT GTGCCACCCG GACCAGTTGG TGCTGGCCTT CCACAGCCGC CCGCAGTACC TCAACAGTGC CTGGCACGGC CTGTTGGCCC TGAGCCTGGA CGGCGAAGTG CTGGCTGCCA ACGACGGTGC CTGCCAGCTG TTGCAGGTGC CGCGTCACGA ACTGATTGGG CGGCGTAGCA CCGACCTGCT GGGCGAACGT TCCCCGGCCT TTATCGCTCG CCTGTGGCAG GGCGGGGTCA GCAGCGTGCA GACCGCCAAG GGCGAGTTCT ATTTCCGTGC CCTACAGCTG CCGCGCCATG GCCGGGTAAC CCCCAGCACA CCATCCAGCA AGCCGGCCTT GAGCAAACAG TCGCCTGCAC TCGATGCTCT GGCCGGAGGT GATCAACGCC TGGCGCGCAA CCTGCGCATG GCTCGCCAGG GGCTGGGCAA TGGTTTGCCA GTGCTGCTGC TGGGCGAAAC CGGTACCGGC AAGGAAGTGG TCGCTCGGGC CTTGCACCAG GCCAGCCCGC GTGCCGACAA ACCGTTTGTG GCGGTCAACT GCGCGGCCAT TCCCGAAGGG CTGATCGAGT CCGAGCTGTT CGGCTACCGT GAGGGCGCCT TCACCGGTTC GCGCCGGGGC GGCATGGTCG GGCGGCTGAT GCAGGCCCAT GGTGGCACGC TGTTCCTCGA CGAAATCGGC GACATGCCGC TCGCCCTGCA AGCACGCCTG TTGCGGGTAC TGCAGGAGCG CCGCGTAGCA CCCTTGGGGG CGGGTGACGA GCAGGACATC GACGTGGCGC TGATCTGCGC CACCCACCGC GACCTCAAGC GCCTGGTGCA GGAGCAGCAC TTCCGTGAAG ACCTGTTCTA CCGGGTCAAC GGTGTGTCGC TGCGCCTGCC GGCCCTGCGT GAACGCGACG ACCTGGCGGC GATCATCCAG GGCCTGCTGG ACAAGGCCGA TGCGCGTGGC GTAACCCTCG ACCCGGCGTT GACCGCGTTG CTCGAAGGCT TCGACTGGCC CGGCAACATC CGTCAGCTGG AAATGGTGGT ACGCACCGCG CTGGCCATGC GCGAGGATGG CGAGCAGGTG CTGACCCTTG ATCACCTTAC TGACTGCCTG CTGGACGAAC TGGCCAGCAG CGCAGCGCCC TCCGGCAGCC TCAAGGACAG TGAACTGGAA CAGATCCGCG GTGCTCTGGC GCGCCATCAG GGCAACGTCT CGGCCGCCGC CGCGGCACTG GGTATCAGCC GGGCGACGCT GTACCGCAAG CTCAAGCAGT TGCGCGGCTG A
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Protein sequence | MARQLITNAH DPLHESREAR LKLASEGELP LGMLRDEIDA SWRRSLGHGL DCLQGEQVGL GLEQGHDLRL LLERNRLLID AVTPELDYLV ARQGKAGIVI LGDAQANVLA IEGQKHVLQR EGLRDLHPGS CWSESLRGTN AIGTAVVEGR PTLINCGEHY LDRLSPFSCT SVPLRDPRGE VIGVLDITRE GVMAQPQDSL STLMLAAGNI ESRLFGLCHP DQLVLAFHSR PQYLNSAWHG LLALSLDGEV LAANDGACQL LQVPRHELIG RRSTDLLGER SPAFIARLWQ GGVSSVQTAK GEFYFRALQL PRHGRVTPST PSSKPALSKQ SPALDALAGG DQRLARNLRM ARQGLGNGLP VLLLGETGTG KEVVARALHQ ASPRADKPFV AVNCAAIPEG LIESELFGYR EGAFTGSRRG GMVGRLMQAH GGTLFLDEIG DMPLALQARL LRVLQERRVA PLGAGDEQDI DVALICATHR DLKRLVQEQH FREDLFYRVN GVSLRLPALR ERDDLAAIIQ GLLDKADARG VTLDPALTAL LEGFDWPGNI RQLEMVVRTA LAMREDGEQV LTLDHLTDCL LDELASSAAP SGSLKDSELE QIRGALARHQ GNVSAAAAAL GISRATLYRK LKQLRG
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