| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_3466 |
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| Symbol | |
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| ID | 1045372 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | - |
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| Start bp | 3931764 |
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| End bp | 3933473 |
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| Gene Length | 1710 bp |
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| Protein Length | 569 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637146882 |
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| Product | efflux ABC transporter ATP-binding protein |
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| Protein accession | NP_745604 |
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| Protein GI | 26990179 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG2274] ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.734482 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGATTCCA GCGACCCTGT ACTCATGCGC CAGGCGTTGG CCTGGCTGTA TGGTTTCGTG
CGCCCCCATC GGCGTGCCAT CGGCCTGTTG CTCAGCTTGT CGCTGGGTGC ATCGCTGCTG
GCGCTGGCGC AACCCTGGCT GGTCAAGACC CTGATCGATG AGGGGCTGCT GGCCAAGGAT
TACCAAACGC TTTGGCACAT GGCGGCAATC ATGATCGGCG CGGGCCTGCT GGGCACTGTG
CTGGCTGGGG TCAACCGCTA CCTGCATACG CGCTTGTCGG GGCGCATCCT GTTTGCCCTG
CGTGACGACC TTTACCGCCA TCTGCAGCAA TTGTCACCGA CCTTTTACGG GCGGCGGCGT
ATCGGCGACA TTCTTTCGCG GCTGGATGGC GATGTGGCAG AGATCCAGCG CTTTGCCGTG
GACTCGCTGT TCTCGGCGGT GTCGGCGGTG ATCGGCCTGG TGGGCGCGGT GACGTTGATG
CTGATGCTGT CGTGGCAGTT GTCGCTGTTG CTGGCGCTGC TGGTGCCGAT CGAAGTGCTG
TGGCTGCGCT GGATGCGGCG CAAGGTGGAG CGCGAAGTGC GCAACTTGCG TGAGCGCTCG
GCGGATGTGT CGTCTTTCCT GGTCGAGACC CTGCCGGCGA TGAAGTTCAT TCAGGCGGCC
GGCCAGCAAG GCCGGGAAGC AGGGCGCCTG GACCAGCTTG GGCAAGGTTA CATGCGTCAG
CTGCTGAAGG TGCAGGTGAC CGAATTCTTC ACCCAGGCCA TCCCCGGCAC GCTCACCTCG
TGGTGCCGCG CCTGTGCGTT CCTGGTCGGT GGCTGGTGGG TGATCCAGGG CACCTGGCAA
CTGGGCGCGT TGATCGCTTT TTCTACTTAC ATGGGCATGG CGGTTGGGCC GGTGCAGAGC
CTGTTGGGCT TGTACGTGGC GGTGCAGCGC ATGGCTGTCA GCCTGGGAAG GGTGATGGAA
TTGAAGCAGG AAGCGGTAGC AGTACATCAG ACCGCCAACC CGCAGCCCAT CCCCGATGGC
CCCGGCGAGT TGCGCCTGGA GGCGCTGAGC TTTGCCCATG AGGGGCGTCA GGGTGCGGTA
CTGAACAACG TGCAGGTGAG CATCCCGGGT GGCCTGAAAG TCGCCATCAG CGGTGCCTCC
GGGGTGGGCA AGTCAACCCT GATCGACCTG CTTCAGCGCT TCTACGACCC GGACGCCGGG
CGCATCCTGC TGGACGGCGT CGACCTGCGC GACCTTGACC TGGCTGCGCT GCGCAGGCGA
ATCGCCGTGG TCAGCCAGGA CATCGTGTTG TTCCGTGGCA CCCTGGCGCA GAACCTGGCT
TATGGCGTGC CCGAGGCCAG CCGTGATGAA CTGGAACGGG TGGTGCGCCT GGCGCGGCTG
GACAGCCTGG TCGACAGCCT GCCGCTGGGC CTGGATGGCT TGCTGGGCGA GCGCGGCCAG
CAGTTGTCCG GGGGCCAGAA ACAACGCATC GCCATTGCTC GTGCAGTGTT GCAGGCCCCG
GCGATCCTGG TGCTGGACGA GGCCACTTCG GCAGTGGATG AGGCCACCGA GCGTGAAGTG
ATCGCGGCCA TCGACCAGCT GTTCGCCGGC CGCACGCGCA TCCTGATCAG CCACCGGGCT
TCGACCCTGG CCGATGCCGA CCTGCAGCTG CAACTGCATG ACGGCCAGTT GCAGGTACTG
GCGCAGGAGG TGATCAAACA TGGGCACTGA
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| Protein sequence | MDSSDPVLMR QALAWLYGFV RPHRRAIGLL LSLSLGASLL ALAQPWLVKT LIDEGLLAKD
YQTLWHMAAI MIGAGLLGTV LAGVNRYLHT RLSGRILFAL RDDLYRHLQQ LSPTFYGRRR
IGDILSRLDG DVAEIQRFAV DSLFSAVSAV IGLVGAVTLM LMLSWQLSLL LALLVPIEVL
WLRWMRRKVE REVRNLRERS ADVSSFLVET LPAMKFIQAA GQQGREAGRL DQLGQGYMRQ
LLKVQVTEFF TQAIPGTLTS WCRACAFLVG GWWVIQGTWQ LGALIAFSTY MGMAVGPVQS
LLGLYVAVQR MAVSLGRVME LKQEAVAVHQ TANPQPIPDG PGELRLEALS FAHEGRQGAV
LNNVQVSIPG GLKVAISGAS GVGKSTLIDL LQRFYDPDAG RILLDGVDLR DLDLAALRRR
IAVVSQDIVL FRGTLAQNLA YGVPEASRDE LERVVRLARL DSLVDSLPLG LDGLLGERGQ
QLSGGQKQRI AIARAVLQAP AILVLDEATS AVDEATEREV IAAIDQLFAG RTRILISHRA
STLADADLQL QLHDGQLQVL AQEVIKHGH
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