| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_3455 |
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| Symbol | |
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| ID | 1045580 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | + |
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| Start bp | 3915029 |
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| End bp | 3916204 |
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| Gene Length | 1176 bp |
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| Protein Length | 391 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637146871 |
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| Product | efflux transporter, RND family, MFP subunit |
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| Protein accession | NP_745593 |
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| Protein GI | 26990168 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.297905 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTACTA CCCTCTCCCC GTGCCTGCGC CCGTTGGCGC TCATGGCCTT GCTGAGCCTG
TCCCTGGCCG GCTGCAGCGA CAGCGCCGAG CCAGACGAAC AGGCCCCCAC CGCGCAAGTG
CGCGTAGAAA CCCTGCAACT GCAGCCACTG GCCATCAGCA GTGAACTCAG CGGCCGTATC
CTCGCGCCAC GCACCGCCGA AGTGCGTGCG CGGGTCGCAG GCGTGGTGCT CAAGCGGGTG
TACCGCGAAG GCAGCGACGT CAAGCAGGGT GATGTACTGT TCCTGATCGA CCCGGCGCCG
TTCAAGGCCG ACCATGACAG CGCCCGCGCC ACACTGGCCA AGGCCGAAGC CACCCGGTAC
CAGGCGCGCC TGCAAGAGCA GCGCTACCGC GAGCTGGTCG ACGACAAAGC CGTCAGCCGC
CAGGAATACG ACAACGCCAA GGCCAGTTTC CTGCAGGCCG ATGCCGAAGT GGCCGAAGCC
AGGGCGGCGC TGGAGCGCGC CCGGCTGAAC CTCGGCTATG CCACCGTGAC CGCGCCGATC
TCCGGCCGTA TCGGCCGCGC CCAGGTCACC GAAGGCGCGC TGGTCGGGCA AAACGAAACC
ACCCCGCTGG CGACCATCCA GCAGTTGGAC CCGATCCATG CCGATGTCAC CCAGTCTACC
CGCGAGCTCA ACGCCCTGCG CCGCGCCCTG CGCGCCGGCG AATTGCAGCA GGTGGGCGAC
GGCCAGGCAC GCGCCACGCT GATCCAGGAT GACGGCAGCG CCTACCCGCT GCCGGGCAAG
CTGCTGTTCT CCGACATCAG CGTCGACCCC AGCACCAACC AGATCACCCT GCGCAGCGAG
TTCCCCAACC CGGACCTCGA CCTGCTGCCA GGCAGCTACG TGCGGGTACG CCTGGAGCAA
GCGGTGCAAC CCAAGGGCCT GAGCGTGCCG CAACGCGCCA TCCTGCGCGA CAGCGCCGGT
GTGCCCAAGG TGCTGGTGGT AGACCAGCAC GCCCGGGTCA GCGACCGCCA GGTTGTACTG
GGCAGCGCCC AGGGTGACCG CTGGATCGTC AGCGAGGGCC TGGCGGCCGG TGAGCGGGTG
GTGGTCGAGG GCCTGCAGCA CGTCAAGGCC GGTGACCAGG TGCAGGTCGA CAACACGCCC
GCTGCCCCAC CCATCGCACA GCATACCGGC CAGTGA
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| Protein sequence | MPTTLSPCLR PLALMALLSL SLAGCSDSAE PDEQAPTAQV RVETLQLQPL AISSELSGRI
LAPRTAEVRA RVAGVVLKRV YREGSDVKQG DVLFLIDPAP FKADHDSARA TLAKAEATRY
QARLQEQRYR ELVDDKAVSR QEYDNAKASF LQADAEVAEA RAALERARLN LGYATVTAPI
SGRIGRAQVT EGALVGQNET TPLATIQQLD PIHADVTQST RELNALRRAL RAGELQQVGD
GQARATLIQD DGSAYPLPGK LLFSDISVDP STNQITLRSE FPNPDLDLLP GSYVRVRLEQ
AVQPKGLSVP QRAILRDSAG VPKVLVVDQH ARVSDRQVVL GSAQGDRWIV SEGLAAGERV
VVEGLQHVKA GDQVQVDNTP AAPPIAQHTG Q
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