Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_3454 |
Symbol | |
ID | 1045523 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 3914082 |
End bp | 3914921 |
Gene Length | 840 bp |
Protein Length | 279 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637146870 |
Product | winged helix family two component transcriptional regulator |
Protein accession | NP_745592 |
Protein GI | 26990167 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.631289 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGTTGGGT TCTATATTCT GCATGGGCCT GTGCTGGCCT CTTCGCGGGT GAACCCGCTC CTACGGGGAC CTGCAGCAGC GGGTTTACCC GCGAAGCGCT CGCCACAGGC TTACTTCAAC CCAGACGCCC AAGCACCTAT GCCGAACATT TTCCTGGTCG AAGACGACAG CGCCCTGTCC GAGCTGATCG CCAGCTACCT GCAACGCAAC GACTTCCATG TCCAGGTGAT CGCCCGGGGC GATCATGTGC TGGACGAGTA CCGTCGGCAA AGGCCTGACC TGGTCATCCT TGACCTGATG CTGCCGGGCA TCGATGGCCT GCAGCTGTGC CGGCTGCTGC GCCAGGAGTC GCAGACCCTG CCAATCCTCA TGCTGACGGC CCGCGACGAT AGCCATGACC AGGTGCTAGG CCTGGAAATG GGGGCCGACG ACTACGTGAC CAAACCCTGT GAGCCACGCG TGCTGCTGGC CCGGGTGCGC ACGCTGCTGC GCCGCAGCAG TGTCAACGAA CCGCGCCTGG ACAACGACCT GATCCTGATT GGTGGCCTGC GTATCGACCT GGCCGAGCGC ACGGTGAGTT GGCGCGGCGA GGAGGTGGAG CTGTCCAGCG GTGAGTACAA CCTGCTGGTG GTGCTGGCGC GCAATGCTGG TGAGGTGATG AACCGCGACC GTATCCTGCA ACAGCTGCGT GGCATCGAGT TCAATGGCAC CGATCGCTCC GTTGACGTGG CCATTTCCAA ACTGCGGCGC AAGTTCGACG ACAACGCCGG CGAAGCGCGC AAGATCAAGA CCGTGTGGGG CAAGGGCTAC CTGTTCAGCC GTGTCGAGTG GGAGTGCTGA
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Protein sequence | MVGFYILHGP VLASSRVNPL LRGPAAAGLP AKRSPQAYFN PDAQAPMPNI FLVEDDSALS ELIASYLQRN DFHVQVIARG DHVLDEYRRQ RPDLVILDLM LPGIDGLQLC RLLRQESQTL PILMLTARDD SHDQVLGLEM GADDYVTKPC EPRVLLARVR TLLRRSSVNE PRLDNDLILI GGLRIDLAER TVSWRGEEVE LSSGEYNLLV VLARNAGEVM NRDRILQQLR GIEFNGTDRS VDVAISKLRR KFDDNAGEAR KIKTVWGKGY LFSRVEWEC
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