| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_3446 |
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| Symbol | ilvA-1 |
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| ID | 1045566 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | - |
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| Start bp | 3903147 |
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| End bp | 3904739 |
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| Gene Length | 1593 bp |
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| Protein Length | 530 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637146862 |
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| Product | threonine dehydratase |
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| Protein accession | NP_745584 |
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| Protein GI | 26990159 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1171] Threonine dehydratase |
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| TIGRFAM ID | [TIGR01124] threonine ammonia-lyase, biosynthetic, long form |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGGCAACG TAAAAATAGC CAAGGAGTCA TCGATGACCA GCTTCAGTGT CCCTCGTACT
ACCGTCACCC CCCAGCAACT GCTGTCGGAG CAGGTGCGTC GCATTCTTGC GGCGCCGGTG
TACGACCTGG CCATTGAAAC GCCCCTGCAA GCGGCCCCGG CCTTGTCTGC CGCCCTGGGC
AACCAGGTGT TGCTCAAGCG CGAAGACCTG CAGCCTACGT TTTCGTTCAA GATCCGGGGT
GCCTACACCC GCCTGTCGCG ACTGACCGAT GTGCAGCGTG AGCGCGGGGT GATCACCGCT
TCGGCGGGCA ACCATGCCCA GGGCGTGGCC TTGGCCGCAT CGCATCTGGG TATGAAGGCA
ACCATCGTCA TGCCCACCAC CACGCCATCG TTGAAAGTGG AAGGCGTGCG TTCGCGCGGC
GGGCATGTGG TGCTGCATGG CGAGAGCTTC CCGCATGCGC TGACCCACGC ACTGAAGCTG
GCCGACAGCG AAGGCGCGAC CTTCGTGCCA CCGTTCGATG ACCCGGATGT GATCGCCGGG
CAGGGTACCG TGGCCATGGA AATCCTCCGT CAGCGCCCTG GGGCGTTGGA CGCGATCTTT
GTGCCCGTGG GCGGTGGCGG CTTGATCGCC GGGATCGCCG CCTATGTGAA GTACCTGCGC
CCTGACGTGA AGGTGATCGG TGTCGAGCCG GCAGATTCCA ACTGCCTGCA GGCTGCCATG
GCCGTCGGCG AGCGCGTGAT CCTGCCGCAG GTGGGCACCT TTGCCGACGG CGTGGCGGTG
GCGCAGATCG GCGCCCATTG CTTCGAGCTG TGCCGCCACT TCGTCGACGA GGTGGTGACG
GTGAGCAGTG ACGAGCTGTG CGCGGCGATC AAGGATATCT ACGACGACAC CCGTTCGATC
ACCGAGCCGT CCGGGGCCTT GGCCGTGGCC GGTATCAAGA AGTACGTGGC GCGTGAAGGT
GTGCAGGGGC AGACCCTGGT GGCCATCGAC TCCGGGGCCA ACGTCAATTT CGACCGCTTG
CGCCATGTGG CCGAGCGGGC CGAGCTGGGT GAGCAGCGCG AGGCGATCAT CGCCGTGACG
ATTCCGGAGC AGCCGGGCAG CTTCCGGGCC TTTTGCCACG CACTGGGCAA GCGGCAGATC
ACCGAATTCA ACTACCGCTT CTACCCCGGG AAGGAGGCGC GCCTGTTCGT GGGCGTGCAG
ACCCACCCGG TGCACGACCC ACGTGAGCAG TTGCTGGCCA GCTTGCGGGA GCAGGGGTAC
AGCGTGCTGG ACCTGACCGA CAACGAGCTG GCCAAGCTGC ATGTGCGCCA TACCGTCGGC
GGACATGCCG CGTCAGGGGC TGATGAGCGG GTACTGCGCT TCGAGTTCCC CGAACGGCCA
GGGGCGTTGC TGGGGTTTCT GGAGCGGTTG GGCAAGCGTT GGAACATCAG CCTGTTCCAT
TACCGCAACC ATGGTGCGGC GGAGGCGCGG GTGTTCGCTG CCTTGGAAGT GCCAGCGGAC
GAGTTGGCGG GCTTGCCGTC GACGCTGGAC GAGATGGGGT ACCGGTACTG GGACGAGACT
GACAACCCGG CGTACAAGCT GTTCCTGGGC TGA
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| Protein sequence | MGNVKIAKES SMTSFSVPRT TVTPQQLLSE QVRRILAAPV YDLAIETPLQ AAPALSAALG
NQVLLKREDL QPTFSFKIRG AYTRLSRLTD VQRERGVITA SAGNHAQGVA LAASHLGMKA
TIVMPTTTPS LKVEGVRSRG GHVVLHGESF PHALTHALKL ADSEGATFVP PFDDPDVIAG
QGTVAMEILR QRPGALDAIF VPVGGGGLIA GIAAYVKYLR PDVKVIGVEP ADSNCLQAAM
AVGERVILPQ VGTFADGVAV AQIGAHCFEL CRHFVDEVVT VSSDELCAAI KDIYDDTRSI
TEPSGALAVA GIKKYVAREG VQGQTLVAID SGANVNFDRL RHVAERAELG EQREAIIAVT
IPEQPGSFRA FCHALGKRQI TEFNYRFYPG KEARLFVGVQ THPVHDPREQ LLASLREQGY
SVLDLTDNEL AKLHVRHTVG GHAASGADER VLRFEFPERP GALLGFLERL GKRWNISLFH
YRNHGAAEAR VFAALEVPAD ELAGLPSTLD EMGYRYWDET DNPAYKLFLG
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