Gene PP_3429 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_3429 
Symbol 
ID1045573 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp3884113 
End bp3885729 
Gene Length1617 bp 
Protein Length538 aa 
Translation table11 
GC content63% 
IMG OID637146845 
Producthistidine kinase 
Protein accessionNP_745567 
Protein GI26990142 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase
[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGCCAGTT CGTTGGCGCT GGATGAACGT GCCTTGATCC TCGCACCGCC ACAACTGGCG 
GCGGATACCT CACGTCTGTT GTCTTCCGCC GGCATCAACA GCCTCTGCGC GGTCGACCTT
GCCAACCTGC AGGCGCGTCT GACCGAGGGC GCAGGGTTGG CGATCATTGC CGAGCAGGTG
TTCAGCCAAG GCCCAAGCAC TTTGCTGCAG GCATTCATCG ACCAGCAACC GAGCTGGTCG
GATTTGCCCA TCGTGCTGCT GACCCAGGGC GCCTGGTCGG CCGCTGGGGT GAATCATCAT
CCAGTGGGCA ATCTTCTCTG GCTGGTCACG CCCTACGAAA ATGCCCAGTT GCTGCACATG
ACCCAGTCCG CGCTGCGCAA CCGGCGGCGA CAGTACGTGA CACGTGATCA ACTCCATGGC
ATGCAGCAGC GCCTGGACAG CCGGCCTTCA ACGCCGGAAG AAGTGCAGGA CCGCGGTGAG
TTCGCCCGCT GCCAGGCACG CAAGATGGAG GCCATCGGCC AACTGGCCGG CGGCGTCGCC
CATGACTTCA ACAACCTGCT CACCAGCATC AGCGGCAGCT TCGAACTCAT CCAGCGGCGC
CTGCGCCAAG GCCGCAGCGA CGGCCTGGAT GGCGTTCTGT GCATGGGCCG CGAGGCCGTT
TCACGCGCCG CCCGCCTGAC CCACCGCTTG CTTGCCTTCT CTTCCCGTCA ATCGCTGCAC
AGCCAACGTA TAGACCTGCA TACCTTGCTC AAGGCAGAAC GCCTGGGCGC TCGCCTGAGC
CCGTCGATAA CCCTGCAAGT GCACGCGGCC AAAGACCTGT GGCCCGTGGA GGCGGATGAC
CAGCAGTTGC AGGAGGCCCT CGACAACCTG CTGCTCAATG CGCGCGAGGC CATGCCCAAC
GGTGGCCTGC TACGCATCGA GGCGAACAAT CATCACATCG CCACCGAGCA AGCTGCTGAC
GGCGCTTTGC GCACTGGCGA CTATGTGCGC CTGCGAATCA CCGACAGCGG CCAAGGCATG
GCGCAAAGCA CGCTGGAGCA CGCCTTCGAA CCCTTCTTCA GCACCAAGGC GACCGGCCAA
GGCATTGGCC TGGGGTTGTC GATGGTGTAC GGTTTCAGCA AGCAGTCCCA TGGGCATATC
ACCCTCAGCA GCGAGATTGG CCAGGGAACC CAGGTGGAGC TGTATTTGCC ACGCCATGTC
GATCAGGCCC TGTCATACAG CGAACCGGTG CCAGCCAGGC AAGACGGCTG CAGCCGACAC
GTGCTGGTTG TCGAGGACGA TCCCCATGTG CGCCAACTGC TTTGCCAGGC GCTGGGCGAA
AACGGCTTCC CCTGCCAAAG CGCAGCCGAC GCCAATGAGG GACTGAAGGT GCTACGCTCG
GCACAACCGG TGGATTTGCT CATCACCGAT GTGGGCTTGC CCGGCATGAA CGGCCGACAA
CTGGCAGAAA TTGCCCGCAG CCTGCGCCCA CGATTACCGG TGCTGTTCAT CACCGGTTAC
GCGGAAACGG CCATGGCCCG CGAAGGCTTC CTGGGCGCTG ACATGCACCT GATCTGCAAG
CCGTTCGAGT TGCAGCAGTT GCAGGCTCGA GTGACACACA TTCTAGGTAA GCCTTGA
 
Protein sequence
MASSLALDER ALILAPPQLA ADTSRLLSSA GINSLCAVDL ANLQARLTEG AGLAIIAEQV 
FSQGPSTLLQ AFIDQQPSWS DLPIVLLTQG AWSAAGVNHH PVGNLLWLVT PYENAQLLHM
TQSALRNRRR QYVTRDQLHG MQQRLDSRPS TPEEVQDRGE FARCQARKME AIGQLAGGVA
HDFNNLLTSI SGSFELIQRR LRQGRSDGLD GVLCMGREAV SRAARLTHRL LAFSSRQSLH
SQRIDLHTLL KAERLGARLS PSITLQVHAA KDLWPVEADD QQLQEALDNL LLNAREAMPN
GGLLRIEANN HHIATEQAAD GALRTGDYVR LRITDSGQGM AQSTLEHAFE PFFSTKATGQ
GIGLGLSMVY GFSKQSHGHI TLSSEIGQGT QVELYLPRHV DQALSYSEPV PARQDGCSRH
VLVVEDDPHV RQLLCQALGE NGFPCQSAAD ANEGLKVLRS AQPVDLLITD VGLPGMNGRQ
LAEIARSLRP RLPVLFITGY AETAMAREGF LGADMHLICK PFELQQLQAR VTHILGKP